Vivek Swarup

Title(s)Assistant Professor, Neurobiology & Behavior
SchoolSchool of Biological Sciences
Address3224 Biological Sciences III
Irvine CA 92697
Phone(949) 824-3182
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    1. Gene networks and systems biology in Alzheimer's disease: Insights from multi-omics approaches. Alzheimers Dement. 2024 Mar 27. Rahimzadeh N, Srinivasan SS, Zhang J, Swarup V. PMID: 38534018.
      View in: PubMed   Mentions:    Fields:    
    2. Relapse to cocaine seeking is regulated by medial habenula NR4A2/NURR1 in mice. Cell Rep. 2024 Mar 26; 43(3):113956. Childs JE, Morabito S, Das S, Santelli C, Pham V, Kusche K, Vera VA, Reese F, Campbell RR, Matheos DP, Swarup V, Wood MA. PMID: 38489267.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    3. BIN1K358R suppresses glial response to plaques in mouse model of Alzheimer's disease. Alzheimers Dement. 2024 Mar 09. Garcia-Agudo LF, Shi Z, Smith IF, Kramár EA, Tran K, Kawauchi S, Wang S, Collins S, Walker A, Shi KX, Neumann J, Liang HY, Da Cunha C, Milinkeviciute G, Morabito S, Miyoshi E, Rezaie N, Gomez-Arboledas A, Arvilla AM, Ghaemi DI, Tenner AJ, LaFerla FM, Wood MA, Mortazavi A, Swarup V, MacGregor GR, Green KN. PMID: 38460121.
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    4. Genetic diversity promotes resilience in a mouse model of Alzheimer's disease. Alzheimers Dement. 2024 Mar 01. Soni N, Hohsfield LA, Tran KM, Kawauchi S, Walker A, Javonillo D, Phan J, Matheos D, Da Cunha C, Uyar A, Milinkeviciute G, Gomez-Arboledas A, Tran K, Kaczorowski CC, Wood MA, Tenner AJ, LaFerla FM, Carter GW, Mortazavi A, Swarup V, MacGregor GR, Green KN. PMID: 38426371.
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    5. Spatial and single-nucleus transcriptomic analysis of genetic and sporadic forms of Alzheimer's Disease. bioRxiv. 2023 Jul 26. Miyoshi E, Morabito S, Henningfield CM, Rahimzadeh N, Kiani Shabestari S, Das S, Michael N, Reese F, Shi Z, Cao Z, Scarfone V, Arreola MA, Lu J, Wright S, Silva J, Leavy K, Lott IT, Doran E, Yong WH, Shahin S, Perez-Rosendahl M, Head E, Green KN, Swarup V. PMID: 37546983; PMCID: PMC10402031.
      View in: PubMed   Mentions:
    6. hdWGCNA identifies co-expression networks in high-dimensional transcriptomics data. Cell Rep Methods. 2023 06 26; 3(6):100498. Morabito S, Reese F, Rahimzadeh N, Miyoshi E, Swarup V. PMID: 37426759; PMCID: PMC10326379.
      View in: PubMed   Mentions: 24  Translation:HumansCells
    7. Integrin-Driven Axon Regeneration in the Spinal Cord Activates a Distinctive CNS Regeneration Program. J Neurosci. 2023 06 28; 43(26):4775-4794. Cheah M, Cheng Y, Petrova V, Cimpean A, Jendelova P, Swarup V, Woolf CJ, Geschwind DH, Fawcett JW. PMID: 37277179; PMCID: PMC10312060.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    8. Proteomic Data Advance Targeted Drug Development for Neurogenerative Diseases. Biol Psychiatry. 2023 05 01; 93(9):754-755. Emerson NE, Swarup V. PMID: 37045511; PMCID: PMC10309651.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    9. A Trem2R47H mouse model without cryptic splicing drives age- and disease-dependent tissue damage and synaptic loss in response to plaques. Mol Neurodegener. 2023 02 17; 18(1):12. Tran KM, Kawauchi S, Kramár EA, Rezaie N, Liang HY, Sakr JS, Gomez-Arboledas A, Arreola MA, Cunha CD, Phan J, Wang S, Collins S, Walker A, Shi KX, Neumann J, Filimban G, Shi Z, Milinkeviciute G, Javonillo DI, Tran K, Gantuz M, Forner S, Swarup V, Tenner AJ, LaFerla FM, Wood MA, Mortazavi A, MacGregor GR, Green KN. PMID: 36803190; PMCID: PMC9938579.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    10. Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation. Nat Commun. 2022 12 21; 13(1):7791. Lim RG, Al-Dalahmah O, Wu J, Gold MP, Reidling JC, Tang G, Adam M, Dansu DK, Park HJ, Casaccia P, Miramontes R, Reyes-Ortiz AM, Lau A, Hickman RA, Khan F, Paryani F, Tang A, Ofori K, Miyoshi E, Michael N, McClure N, Flowers XE, Vonsattel JP, Davidson S, Menon V, Swarup V, Fraenkel E, Goldman JE, Thompson LM. PMID: 36543778; PMCID: PMC9772349.
      View in: PubMed   Mentions: 9     Fields:    
    11. Single-nuclei transcriptome analysis of Huntington disease iPSC and mouse astrocytes implicates maturation and functional deficits. iScience. 2023 Jan 20; 26(1):105732. Reyes-Ortiz AM, Abud EM, Burns MS, Wu J, Hernandez SJ, McClure N, Wang KQ, Schulz CJ, Miramontes R, Lau A, Michael N, Miyoshi E, Van Vactor D, Reidling JC, Blurton-Jones M, Swarup V, Poon WW, Lim RG, Thompson LM. PMID: 36590162; PMCID: PMC9800269.
      View in: PubMed   Mentions: 2  
    12. Broad transcriptomic dysregulation occurs across the cerebral cortex in ASD. Nature. 2022 Nov; 611(7936):532-539. Gandal MJ, Haney JR, Wamsley B, Yap CX, Parhami S, Emani PS, Chang N, Chen GT, Hoftman GD, de Alba D, Ramaswami G, Hartl CL, Bhattacharya A, Luo C, Jin T, Wang D, Kawaguchi R, Quintero D, Ou J, Wu YE, Parikshak NN, Swarup V, Belgard TG, Gerstein M, Pasaniuc B, Geschwind DH. PMID: 36323788; PMCID: PMC9668748.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    13. Pathway-based approach reveals differential sensitivity to E2F1 inhibition in glioblastoma. Cancer Res Commun. 2022 09; 2(9):1049-1060. Alvarado AG, Tessema K, Muthukrishnan SD, Sober M, Kawaguchi R, Laks DR, Bhaduri A, Swarup V, Nathanson DA, Geschwind DH, Goldman SA, Kornblum HI. PMID: 36213002; PMCID: PMC9536135.
      View in: PubMed   Mentions: Translation:HumansCells
    14. Molecular signatures underlying neurofibrillary tangle susceptibility in Alzheimer's disease. Neuron. 2022 09 21; 110(18):2929-2948.e8. Otero-Garcia M, Mahajani SU, Wakhloo D, Tang W, Xue YQ, Morabito S, Pan J, Oberhauser J, Madira AE, Shakouri T, Deng Y, Allison T, He Z, Lowry WE, Kawaguchi R, Swarup V, Cobos I. PMID: 35882228; PMCID: PMC9509477.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    15. Protocol for single-nucleus ATAC sequencing and bioinformatic analysis in frozen human brain tissue. STAR Protoc. 2022 09 16; 3(3):101491. Shi Z, Das S, Morabito S, Miyoshi E, Swarup V. PMID: 35755130; PMCID: PMC9218237.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    16. Absence of microglia promotes diverse pathologies and early lethality in Alzheimer's disease mice. Cell Rep. 2022 06 14; 39(11):110961. Kiani Shabestari S, Morabito S, Danhash EP, McQuade A, Sanchez JR, Miyoshi E, Chadarevian JP, Claes C, Coburn MA, Hasselmann J, Hidalgo J, Tran KN, Martini AC, Chang Rothermich W, Pascual J, Head E, Hume DA, Pridans C, Davtyan H, Swarup V, Blurton-Jones M. PMID: 35705056; PMCID: PMC9285116.
      View in: PubMed   Mentions: 32     Fields:    Translation:HumansAnimalsCells
    17. Cortical diurnal rhythms remain intact with microglial depletion. Sci Rep. 2022 01 07; 12(1):114. Barahona RA, Morabito S, Swarup V, Green KN. PMID: 34997092; PMCID: PMC8742049.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    18. Rogue gene networks gone awry in Alzheimer's disease. Neural Regen Res. 2021 Dec; 16(12):2415-2416. Miyoshi E, Swarup V. PMID: 33907024; PMCID: PMC8374567.
      View in: PubMed   Mentions: 1  
    19. Systems biology approaches to unravel the molecular and genetic architecture of Alzheimer's disease and related tauopathies. Neurobiol Dis. 2021 12; 160:105530. Miyoshi E, Morabito S, Swarup V. PMID: 34634459; PMCID: PMC8616667.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    20. Microglial dyshomeostasis drives perineuronal net and synaptic loss in a CSF1R+/- mouse model of ALSP, which can be rescued via CSF1R inhibitors. Sci Adv. 2021 Aug; 7(35). Arreola MA, Soni N, Crapser JD, Hohsfield LA, Elmore MRP, Matheos DP, Wood MA, Swarup V, Mortazavi A, Green KN. PMID: 34433559; PMCID: PMC8386924.
      View in: PubMed   Mentions: 18     Fields:    
    21. Single-nucleus chromatin accessibility and transcriptomic characterization of Alzheimer's disease. Nat Genet. 2021 08; 53(8):1143-1155. Morabito S, Miyoshi E, Michael N, Shahin S, Martini AC, Head E, Silva J, Leavy K, Perez-Rosendahl M, Swarup V. PMID: 34239132; PMCID: PMC8766217.
      View in: PubMed   Mentions: 148     Fields:    Translation:HumansCells
    22. Cocaine induces paradigm-specific changes to the transcriptome within the ventral tegmental area. Neuropsychopharmacology. 2021 09; 46(10):1768-1779. Campbell RR, Chen S, Beardwood JH, López AJ, Pham LV, Keiser AM, Childs JE, Matheos DP, Swarup V, Baldi P, Wood MA. PMID: 34155331; PMCID: PMC8357835.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCells
    23. Generation of a humanized Aβ expressing mouse demonstrating aspects of Alzheimer's disease-like pathology. Nat Commun. 2021 04 23; 12(1):2421. Baglietto-Vargas D, Forner S, Cai L, Martini AC, Trujillo-Estrada L, Swarup V, Nguyen MMT, Do Huynh K, Javonillo DI, Tran KM, Phan J, Jiang S, Kramár EA, Nuñez-Diaz C, Balderrama-Gutierrez G, Garcia F, Childs J, Rodriguez-Ortiz CJ, Garcia-Leon JA, Kitazawa M, Shahnawaz M, Matheos DP, Ma X, Da Cunha C, Walls KC, Ager RR, Soto C, Gutierrez A, Moreno-Gonzalez I, Mortazavi A, Tenner AJ, MacGregor GR, Wood M, Green KN, LaFerla FM. PMID: 33893290; PMCID: PMC8065162.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansAnimals
    24. Unexpected Role of Physiological Estrogen in Acute Stress-Induced Memory Deficits. J Neurosci. 2021 01 27; 41(4):648-662. Hokenson RE, Short AK, Chen Y, Pham AL, Adams ET, Bolton JL, Swarup V, Gall CM, Baram TZ. PMID: 33262247; PMCID: PMC7842761.
      View in: PubMed   Mentions: 16     Fields:    Translation:AnimalsCells
    25. Tau Pathology Drives Dementia Risk-Associated Gene Networks toward Chronic Inflammatory States and Immunosuppression. Cell Rep. 2020 11 17; 33(7):108398. Rexach JE, Polioudakis D, Yin A, Swarup V, Chang TS, Nguyen T, Sarkar A, Chen L, Huang J, Lin LC, Seeley W, Trojanowski JQ, Malhotra D, Geschwind DH. PMID: 33207193; PMCID: PMC7842189.
      View in: PubMed   Mentions: 41     Fields:    Translation:HumansAnimalsCells
    26. Integrative genomics approach identifies conserved transcriptomic networks in Alzheimer's disease. Hum Mol Genet. 2020 10 10; 29(17):2899-2919. Morabito S, Miyoshi E, Michael N, Swarup V. PMID: 32803238; PMCID: PMC7566321.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    27. Microglia-organized scar-free spinal cord repair in neonatal mice. Nature. 2020 11; 587(7835):613-618. Li Y, He X, Kawaguchi R, Zhang Y, Wang Q, Monavarfeshani A, Yang Z, Chen B, Shi Z, Meng H, Zhou S, Zhu J, Jacobi A, Swarup V, Popovich PG, Geschwind DH, He Z. PMID: 33029008; PMCID: PMC7704837.
      View in: PubMed   Mentions: 113     Fields:    Translation:AnimalsCells
    28. Effects of long-term and brain-wide colonization of peripheral bone marrow-derived myeloid cells in the CNS. J Neuroinflammation. 2020 Sep 20; 17(1):279. Hohsfield LA, Najafi AR, Ghorbanian Y, Soni N, Hingco EE, Kim SJ, Jue AD, Swarup V, Inlay MA, Green KN. PMID: 32951604; PMCID: PMC7504855.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    29. Pharmacokinetic, behavioral, and brain activity effects of Δ9-tetrahydrocannabinol in adolescent male and female rats. Neuropsychopharmacology. 2021 04; 46(5):959-969. Ruiz CM, Torrens A, Castillo E, Perrone CR, Cevallos J, Inshishian VC, Harder EV, Justeson DN, Huestis MA, Swarup V, Piomelli D, Mahler SV. PMID: 32927465; PMCID: PMC8115040.
      View in: PubMed   Mentions: 25     Fields:    Translation:Animals
    30. Meta-Analysis of the Alzheimer's Disease Human Brain Transcriptome and Functional Dissection in Mouse Models. Cell Rep. 2020 07 14; 32(2):107908. Wan YW, Al-Ouran R, Mangleburg CG, Perumal TM, Lee TV, Allison K, Swarup V, Funk CC, Gaiteri C, Allen M, Wang M, Neuner SM, Kaczorowski CC, Philip VM, Howell GR, Martini-Stoica H, Zheng H, Mei H, Zhong X, Kim JW, Dawson VL, Dawson TM, Pao PC, Tsai LH, Haure-Mirande JV, Ehrlich ME, Chakrabarty P, Levites Y, Wang X, Dammer EB, Srivastava G, Mukherjee S, Sieberts SK, Omberg L, Dang KD, Eddy JA, Snyder P, Chae Y, Amberkar S, Wei W, Hide W, Preuss C, Ergun A, Ebert PJ, Airey DC, Mostafavi S, Yu L, Klein HU, Accelerating Medicines Partnership-Alzheimer’s Disease Consortium, Carter GW, Collier DA, Golde TE, Levey AI, Bennett DA, Estrada K, Townsend TM, Zhang B, Schadt E, De Jager PL, Price ND, Ertekin-Taner N, Liu Z, Shulman JM, Mangravite LM, Logsdon BA. PMID: 32668255; PMCID: PMC7428328.
      View in: PubMed   Mentions: 115     Fields:    Translation:HumansAnimalsCells
    31. Atypical Neurogenesis in Induced Pluripotent Stem Cells From Autistic Individuals. Biol Psychiatry. 2021 03 01; 89(5):486-496. Adhya D, Swarup V, Nagy R, Dutan L, Shum C, Valencia-Alarcón EP, Jozwik KM, Mendez MA, Horder J, Loth E, Nowosiad P, Lee I, Skuse D, Flinter FA, Murphy D, McAlonan G, Geschwind DH, Price J, Carroll J, Srivastava DP, Baron-Cohen S. PMID: 32826066; PMCID: PMC7843956.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    32. Identification of Conserved Proteomic Networks in Neurodegenerative Dementia. Cell Rep. 2020 06 23; 31(12):107807. Swarup V, Chang TS, Duong DM, Dammer EB, Dai J, Lah JJ, Johnson ECB, Seyfried NT, Levey AI, Geschwind DH. PMID: 32579933; PMCID: PMC8221021.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    33. Selenium Drives a Transcriptional Adaptive Program to Block Ferroptosis and Treat Stroke. Cell. 2019 05 16; 177(5):1262-1279.e25. Alim I, Caulfield JT, Chen Y, Swarup V, Geschwind DH, Ivanova E, Seravalli J, Ai Y, Sansing LH, Ste Marie EJ, Hondal RJ, Mukherjee S, Cave JW, Sagdullaev BT, Karuppagounder SS, Ratan RR. PMID: 31056284.
      View in: PubMed   Mentions: 334     Fields:    Translation:HumansAnimalsCells
    34. Identification of evolutionarily conserved gene networks mediating neurodegenerative dementia. Nat Med. 2019 01; 25(1):152-164. Swarup V, Hinz FI, Rexach JE, Noguchi KI, Toyoshiba H, Oda A, Hirai K, Sarkar A, Seyfried NT, Cheng C, Haggarty SJ, International Frontotemporal Dementia Genomics Consortium, Grossman M, Van Deerlin VM, Trojanowski JQ, Lah JJ, Levey AI, Kondou S, Geschwind DH. PMID: 30510257; PMCID: PMC6602064.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansAnimalsCells
    35. Transcriptional Signatures in Liver Reveal Metabolic Adaptations to Seasons in Migratory Blackheaded Buntings. Front Physiol. 2018; 9:1568. Singh D, Swarup V, Le H, Kumar V. PMID: 30538637; PMCID: PMC6277527.
      View in: PubMed   Mentions: 9  
    36. Integrative network analysis reveals biological pathways associated with Williams syndrome. J Child Psychol Psychiatry. 2019 05; 60(5):585-598. Kimura R, Swarup V, Tomiwa K, Gandal MJ, Parikshak NN, Funabiki Y, Nakata M, Awaya T, Kato T, Iida K, Okazaki S, Matsushima K, Kato T, Murai T, Heike T, Geschwind DH, Hagiwara M. PMID: 30362171; PMCID: PMC7379192.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    37. Autism-like phenotype and risk gene mRNA deadenylation by CPEB4 mis-splicing. Nature. 2018 08; 560(7719):441-446. Parras A, Anta H, Santos-Galindo M, Swarup V, Elorza A, Nieto-González JL, Picó S, Hernández IH, Díaz-Hernández JI, Belloc E, Rodolosse A, Parikshak NN, Peñagarikano O, Fernández-Chacón R, Irimia M, Navarro P, Geschwind DH, Méndez R, Lucas JJ. PMID: 30111840; PMCID: PMC6217926.
      View in: PubMed   Mentions: 51     Fields:    Translation:HumansAnimalsCells
    38. Author Correction: Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism. Nature. 2018 08; 560(7718):E30. Parikshak NN, Swarup V, Belgard TG, Irimia M, Ramaswami G, Gandal MJ, Hartl C, Leppa V, de la Torre Ubieta L, Huang J, Lowe JK, Blencowe BJ, Horvath S, Geschwind DH. PMID: 29995847.
      View in: PubMed   Mentions: 4     Fields:    
    39. From the Cover: 2.45-GHz Microwave Radiation Impairs Hippocampal Learning and Spatial Memory: Involvement of Local Stress Mechanism-Induced Suppression of iGluR/ERK/CREB Signaling. Toxicol Sci. 2018 02 01; 161(2):349-374. Shahin S, Banerjee S, Swarup V, Singh SP, Chaturvedi CM. PMID: 29069439.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    40. Inducible and reversible phenotypes in a novel mouse model of Friedreich's Ataxia. Elife. 2017 12 19; 6. Chandran V, Gao K, Swarup V, Versano R, Dong H, Jordan MC, Geschwind DH. PMID: 29257745; PMCID: PMC5736353.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansAnimals
    41. NitroSynapsin therapy for a mouse MEF2C haploinsufficiency model of human autism. Nat Commun. 2017 11 14; 8(1):1488. Tu S, Akhtar MW, Escorihuela RM, Amador-Arjona A, Swarup V, Parker J, Zaremba JD, Holland T, Bansal N, Holohan DR, Lopez K, Ryan SD, Chan SF, Yan L, Zhang X, Huang X, Sultan A, McKercher SR, Ambasudhan R, Xu H, Wang Y, Geschwind DH, Roberts AJ, Terskikh AV, Rissman RA, Masliah E, Lipton SA, Nakanishi N. PMID: 29133852; PMCID: PMC5684358.
      View in: PubMed   Mentions: 42     Fields:    Translation:HumansAnimalsCells
    42. Conserved brain myelination networks are altered in Alzheimer's and other neurodegenerative diseases. Alzheimers Dement. 2018 03; 14(3):352-366. Allen M, Wang X, Burgess JD, Watzlawik J, Serie DJ, Younkin CS, Nguyen T, Malphrus KG, Lincoln S, Carrasquillo MM, Ho C, Chakrabarty P, Strickland S, Murray ME, Swarup V, Geschwind DH, Seyfried NT, Dammer EB, Lah JJ, Levey AI, Golde TE, Funk C, Li H, Price ND, Petersen RC, Graff-Radford NR, Younkin SG, Dickson DW, Crook JR, Asmann YW, Ertekin-Taner N. PMID: 29107053; PMCID: PMC5866744.
      View in: PubMed   Mentions: 66     Fields:    Translation:HumansCells
    43. A Multi-network Approach Identifies Protein-Specific Co-expression in Asymptomatic and Symptomatic Alzheimer's Disease. Cell Syst. 2017 01 25; 4(1):60-72.e4. Seyfried NT, Dammer EB, Swarup V, Nandakumar D, Duong DM, Yin L, Deng Q, Nguyen T, Hales CM, Wingo T, Glass J, Gearing M, Thambisetty M, Troncoso JC, Geschwind DH, Lah JJ, Levey AI. PMID: 27989508; PMCID: PMC5269514.
      View in: PubMed   Mentions: 221     Fields:    Translation:HumansCells
    44. Genome-wide changes in lncRNA, splicing, and regional gene expression patterns in autism. Nature. 2016 12 15; 540(7633):423-427. Parikshak NN, Swarup V, Belgard TG, Irimia M, Ramaswami G, Gandal MJ, Hartl C, Leppa V, Ubieta LT, Huang J, Lowe JK, Blencowe BJ, Horvath S, Geschwind DH. PMID: 27919067; PMCID: PMC7102905.
      View in: PubMed   Mentions: 315     Fields:    Translation:HumansAnimalsCells
    45. The PsychENCODE project. Nat Neurosci. 2015 Dec; 18(12):1707-12. PsychENCODE Consortium, Akbarian S, Liu C, Knowles JA, Vaccarino FM, Farnham PJ, Crawford GE, Jaffe AE, Pinto D, Dracheva S, Geschwind DH, Mill J, Nairn AC, Abyzov A, Pochareddy S, Prabhakar S, Weissman S, Sullivan PF, State MW, Weng Z, Peters MA, White KP, Gerstein MB, Amiri A, Armoskus C, Ashley-Koch AE, Bae T, Beckel-Mitchener A, Berman BP, Coetzee GA, Coppola G, Francoeur N, Fromer M, Gao R, Grennan K, Herstein J, Kavanagh DH, Ivanov NA, Jiang Y, Kitchen RR, Kozlenkov A, Kundakovic M, Li M, Li Z, Liu S, Mangravite LM, Mattei E, Markenscoff-Papadimitriou E, Navarro FC, North N, Omberg L, Panchision D, Parikshak N, Poschmann J, Price AJ, Purcaro M, Reddy TE, Roussos P, Schreiner S, Scuderi S, Sebra R, Shibata M, Shieh AW, Skarica M, Sun W, Swarup V, Thomas A, Tsuji J, van Bakel H, Wang D, Wang Y, Wang K, Werling DM, Willsey AJ, Witt H, Won H, Wong CC, Wray GA, Wu EY, Xu X, Yao L, Senthil G, Lehner T, Sklar P, Sestan N. PMID: 26605881; PMCID: PMC4675669.
      View in: PubMed   Mentions: 208     Fields:    Translation:HumansAnimalsCells
    46. The emerging picture of autism spectrum disorder: genetics and pathology. Annu Rev Pathol. 2015; 10:111-44. Chen JA, Peñagarikano O, Belgard TG, Swarup V, Geschwind DH. PMID: 25621659.
      View in: PubMed   Mentions: 132     Fields:    Translation:HumansAnimals
    47. Alzheimer's disease: From big data to mechanism. Nature. 2013 Aug 01; 500(7460):34-5. Swarup V, Geschwind DH. PMID: 23883924; PMCID: PMC4409124.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    48. Abnormal regenerative responses and impaired axonal outgrowth after nerve crush in TDP-43 transgenic mouse models of amyotrophic lateral sclerosis. J Neurosci. 2012 Dec 12; 32(50):18186-95. Swarup V, Audet JN, Phaneuf D, Kriz J, Julien JP. PMID: 23238732; PMCID: PMC6621743.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    49. Galectin-3 is required for resident microglia activation and proliferation in response to ischemic injury. J Neurosci. 2012 Jul 25; 32(30):10383-95. Lalancette-Hébert M, Swarup V, Beaulieu JM, Bohacek I, Abdelhamid E, Weng YC, Sato S, Kriz J. PMID: 22836271; PMCID: PMC6703730.
      View in: PubMed   Mentions: 136     Fields:    Translation:AnimalsCells
    50. Deregulation of TDP-43 in amyotrophic lateral sclerosis triggers nuclear factor κB-mediated pathogenic pathways. J Exp Med. 2011 Nov 21; 208(12):2429-47. Swarup V, Phaneuf D, Dupré N, Petri S, Strong M, Kriz J, Julien JP. PMID: 22084410; PMCID: PMC3256969.
      View in: PubMed   Mentions: 177     Fields:    Translation:HumansAnimalsCells
    51. Pathological hallmarks of amyotrophic lateral sclerosis/frontotemporal lobar degeneration in transgenic mice produced with TDP-43 genomic fragments. Brain. 2011 Sep; 134(Pt 9):2610-26. Swarup V, Phaneuf D, Bareil C, Robertson J, Rouleau GA, Kriz J, Julien JP. PMID: 21752789.
      View in: PubMed   Mentions: 123     Fields:    Translation:HumansAnimalsCells
    52. ALS pathogenesis: recent insights from genetics and mouse models. Prog Neuropsychopharmacol Biol Psychiatry. 2011 Mar 30; 35(2):363-9. Swarup V, Julien JP. PMID: 20728492.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    53. Therapeutic effect of a novel anilidoquinoline derivative, 2-(2-methyl-quinoline-4ylamino)-N-(2-chlorophenyl)-acetamide, in Japanese encephalitis: correlation with in vitro neuroprotection. Int J Antimicrob Agents. 2008 Oct; 32(4):349-54. Ghosh J, Swarup V, Saxena A, Das S, Hazra A, Paira P, Banerjee S, Mondal NB, Basu A. PMID: 18674886.
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    54. Tumor necrosis factor receptor-associated death domain mediated neuronal death contributes to the glial activation and subsequent neuroinflammation in Japanese encephalitis. Neurochem Int. 2008 Jun; 52(7):1310-21. Swarup V, Ghosh J, Das S, Basu A. PMID: 18325634.
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    55. Novel strategy for treatment of Japanese encephalitis using arctigenin, a plant lignan. J Antimicrob Chemother. 2008 Mar; 61(3):679-88. Swarup V, Ghosh J, Mishra MK, Basu A. PMID: 18230688.
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    56. Tumor necrosis factor receptor-1-induced neuronal death by TRADD contributes to the pathogenesis of Japanese encephalitis. J Neurochem. 2007 Oct; 103(2):771-83. Swarup V, Das S, Ghosh S, Basu A. PMID: 17666051.
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    57. Antiviral and anti-inflammatory effects of rosmarinic acid in an experimental murine model of Japanese encephalitis. Antimicrob Agents Chemother. 2007 Sep; 51(9):3367-70. Swarup V, Ghosh J, Ghosh S, Saxena A, Basu A. PMID: 17576830; PMCID: PMC2043228.
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    58. Japanese encephalitis virus infection decrease endogenous IL-10 production: correlation with microglial activation and neuronal death. Neurosci Lett. 2007 Jun 13; 420(2):144-9. Swarup V, Ghosh J, Duseja R, Ghosh S, Basu A. PMID: 17531383.
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