Farahnaz Rahmatpanah

Title(s)Assistant Professor In Residence, Pathology
SchoolSchool of Medicine
Address1001 Health Sciences Road
Irvine CA 92697-3950
Phone(949) 824-5298
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Effect of knocking out mouse Slc44a4 on colonic uptake of the microbiota-generated thiamine pyrophosphate and colon physiology. Am J Physiol Gastrointest Liver Physiol. 2024 Jul 01; 327(1):G36-G46. Sabui S, Anthonymuthu S, Ramamoorthy K, Skupsky J, Jennings TSK, Rahmatpanah F, Fleckenstein JM, Said HM. PMID: 38713615; PMCID: PMC11376973.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    2. Changes in the innate immune response to SARS-CoV-2 with advancing age in humans. Immun Ageing. 2024 Mar 21; 21(1):21. Agrawal S, Tran MT, Jennings TSK, Soliman MMH, Heo S, Sasson B, Rahmatpanah F, Agrawal A. PMID: 38515147; PMCID: PMC10956333.
      View in: PubMed   Mentions: 2  
    3. Endogenous Retrovirus RNA Expression Differences between Race, Stage and HPV Status Offer Improved Prognostication among Women with Cervical Cancer. Int J Mol Sci. 2023 Jan 12; 24(2). Alldredge J, Kumar V, Nguyen J, Sanders BE, Gomez K, Jayachandran K, Zhang J, Schwarz J, Rahmatpanah F. PMID: 36675007; PMCID: PMC9864224.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    4. Spatial Profiling of the Prostate Cancer Tumor Microenvironment Reveals Multiple Differences in Gene Expression and Correlation with Recurrence Risk. Cancers (Basel). 2022 Oct 08; 14(19). Kumar V, Randhawa P, Bilodeau R, Mercola D, McClelland M, Agrawal A, Nguyen J, Castro P, Ittmann MM, Rahmatpanah F. PMID: 36230846; PMCID: PMC9562240.
      View in: PubMed   Mentions: 2  
    5. Expression of Endogenous Retroviral RNA in Prostate Tumors has Prognostic Value and Shows Differences among Americans of African Versus European/Middle Eastern Ancestry. Cancers (Basel). 2021 Dec 17; 13(24). Kumar V, McClelland M, Nguyen J, De Robles G, Ittmann M, Castro P, Mercola D, Jia Z, Rahmatpanah F. PMID: 34944967; PMCID: PMC8699453.
      View in: PubMed   Mentions: 3  
    6. Editorial: Therapeutic Opportunities and Innovative Biomarkers in Tumor Microenvironment. Front Oncol. 2021; 11:803414. Xu K, Rahmatpanah F, Jia Z. PMID: 34917516; PMCID: PMC8669590.
      View in: PubMed   Mentions: 1  
    7. Vitamin C Enhances Antiviral Functions of Lung Epithelial Cells. Biomolecules. 2021 08 03; 11(8). Teafatiller T, Agrawal S, De Robles G, Rahmatpanah F, Subramanian VS, Agrawal A. PMID: 34439814; PMCID: PMC8394979.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCells
    8. RNA expression differences in prostate tumors and tumor-adjacent stroma between Black and White Americans. Oncotarget. 2021 Jul 20; 12(15):1457-1469. Rahmatpanah F, Robles G, Lilly M, Keane T, Kumar V, Mercola D, Randhawa P, McClelland M. PMID: 34316327; PMCID: PMC8310667.
      View in: PubMed   Mentions: 10     Fields:    
    9. Transcriptome Analysis of Ovarian and Uterine Clear Cell Malignancies. Front Oncol. 2020; 10:598579. Alldredge J, Randall L, De Robles G, Agrawal A, Mercola D, Liu M, Randhawa P, Edwards R, McClelland M, Rahmatpanah F. PMID: 33415077; PMCID: PMC7784081.
      View in: PubMed   Mentions: 10  
    10. Correction: Airway epithelial cells prime plasmacytoid dendritic cells to respond to pathogens via secretion of growth factors. Mucosal Immunol. 2019 05; 12(3):841. Rahmatpanah F, Agrawal S, Jaiswal N, Nguyen HM, McClelland M, Agrawal A. PMID: 30705377; PMCID: PMC7608114.
      View in: PubMed   Mentions:    Fields:    
    11. Transcriptional Profiling of Age-Associated Gene Expression Changes in Human Circulatory CD1c+ Myeloid Dendritic Cell Subset. J Gerontol A Biol Sci Med Sci. 2019 01 01; 74(1):9-15. Rahmatpanah F, Agrawal S, Scarfone VM, Kapadia S, Mercola D, Agrawal A. PMID: 29718193; PMCID: PMC6298184.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    12. Airway epithelial cells prime plasmacytoid dendritic cells to respond to pathogens via secretion of growth factors. Mucosal Immunol. 2019 01; 12(1):77-84. Rahmatpanah F, Agrawal S, Jaiswal N, Nguyen HM, McClelland M, Agrawal A. PMID: 30279511; PMCID: PMC6301110.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    13. Airway epithelial cells enhance the immunogenicity of human myeloid dendritic cells under steady state. Clin Exp Immunol. 2017 09; 189(3):279-289. Agrawal S, Srivastava R, Rahmatpanah F, Madiraju C, BenMohamed L, Agrawal A. PMID: 28470729; PMCID: PMC5543474.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    14. Correction: Overexpression of periostin in stroma positively associated with aggressive prostate cancer. PLoS One. 2015; 10(6):e0130333. Tian Y, Choi CH, Li QK, Rahmatpanah FB, Chen X, Kim SR, Veltri R, Chia D, Zhang Z, Mercola D, Zhang H. PMID: 26043260; PMCID: PMC4456420.
      View in: PubMed   Mentions: 1     Fields:    
    15. Overexpression of periostin in stroma positively associated with aggressive prostate cancer. PLoS One. 2015; 10(3):e0121502. Tian Y, Choi CH, Li QK, Rahmatpanah FB, Chen X, Kim SR, Veltri R, Chia D, Zhang Z, Mercola D, Zhang H. PMID: 25781169; PMCID: PMC4362940.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    16. The identification of trans-associations between prostate cancer GWAS SNPs and RNA expression differences in tumor-adjacent stroma. Oncotarget. 2015 Jan 30; 6(3):1865-73. Chen X, McClelland M, Jia Z, Rahmatpanah FB, Sawyers A, Trent J, Duggan D, Mercola D. PMID: 25638161; PMCID: PMC4359337.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    17. A class of genes in the HER2 regulon that is poised for transcription in breast cancer cell lines and expressed in human breast tumors. Oncotarget. 2015 Jan 20; 6(2):1286-301. Rahmatpanah FB, Jia Z, Chen X, Char JE, Men B, Franke AC, Jones FE, McClelland M, Mercola D. PMID: 25428913; PMCID: PMC4359233.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    18. Role of the adjacent stroma cells in prostate cancer development and progression: synergy between TGF-β and IGF signaling. Biomed Res Int. 2014; 2014:502093. Lee C, Jia Z, Rahmatpanah F, Zhang Q, Zi X, McClelland M, Mercola D. PMID: 25089270; PMCID: PMC4095744.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    19. Expression differences between African American and Caucasian prostate cancer tissue reveals that stroma is the site of aggressive changes. Int J Cancer. 2014 Jan 01; 134(1):81-91. Kinseth MA, Jia Z, Rahmatpanah F, Sawyers A, Sutton M, Wang-Rodriguez J, Mercola D, McGuire KL. PMID: 23754304; PMCID: PMC3800217.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansCells
    20. An accurate prostate cancer prognosticator using a seven-gene signature plus Gleason score and taking cell type heterogeneity into account. PLoS One. 2012; 7(9):e45178. Chen X, Xu S, McClelland M, Rahmatpanah F, Sawyers A, Jia Z, Mercola D. PMID: 23028830; PMCID: PMC3460942.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    21. Expression changes in the stroma of prostate cancer predict subsequent relapse. PLoS One. 2012; 7(8):e41371. Jia Z, Rahmatpanah FB, Chen X, Lernhardt W, Wang Y, Xia XQ, Sawyers A, Sutton M, McClelland M, Mercola D. PMID: 22870216; PMCID: PMC3411675.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCTClinical Trials
    22. TGF-β mediated DNA methylation in prostate cancer. Transl Androl Urol. 2012 Jun; 1(2):78-88. Lee C, Zhang Q, Zi X, Dash A, Soares MB, Rahmatpanah F, Jia Z, McClelland M, Mercola D. PMID: 25133096; PMCID: PMC4131550.
      View in: PubMed   Mentions: 10  
    23. Expression of HER2 in Breast Cancer Promotes a Massive Reorganization of Gene Activity and Suggests a Role for Epigenetic Regulation. J Data Mining Genomics Proteomics. 2012; 3. Rahmatpanah F, Jia Z, Chen X, Jones FE, McClelland M, Mercola D. PMID: 24009986; PMCID: PMC3760961.
      View in: PubMed   Mentions: 2  
    24. Diagnosis of prostate cancer using differentially expressed genes in stroma. Cancer Res. 2011 Apr 01; 71(7):2476-87. Jia Z, Wang Y, Sawyers A, Yao H, Rahmatpanah F, Xia XQ, Xu Q, Pio R, Turan T, Koziol JA, Goodison S, Carpenter P, Wang-Rodriguez J, Simoneau A, Meyskens F, Sutton M, Lernhardt W, Beach T, Monforte J, McClelland M, Mercola D. PMID: 21459804; PMCID: PMC3071046.
      View in: PubMed   Mentions: 62     Fields:    Translation:HumansCells
    25. Epigenetic regulation of WNT signaling in chronic lymphocytic leukemia. Epigenomics. 2010 Feb 01; 2(1):53-70. Bennett LB, Taylor KH, Arthur GL, Rahmatpanah FB, Hooshmand SI, Caldwell CW. PMID: 20473358; PMCID: PMC2869094.
      View in: PubMed   Mentions: 10     Fields:    
    26. Hypermethylation of the DLC1 CpG island does not alter gene expression in canine lymphoma. BMC Genet. 2009 Nov 13; 10:73. Bryan JN, Jabbes M, Berent LM, Arthur GL, Taylor KH, Rissetto KC, Henry CJ, Rahmatpanah F, Rankin WV, Villamil JA, Lewis MR, Caldwell CW. PMID: 19912643; PMCID: PMC2784477.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    27. Large-scale analysis of DNA methylation in chronic lymphocytic leukemia. Epigenomics. 2009 Oct; 1(1):39-61. Rahmatpanah FB, Carstens S, Hooshmand SI, Welsh EC, Sjahputera O, Taylor KH, Bennett LB, Shi H, Davis JW, Arthur GL, Shanafelt TD, Kay NE, Wooldridge JE, Caldwell CW. PMID: 20495622; PMCID: PMC2872502.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    28. Algorithmic discovery of methylation "hot spots" in DNA from lymphoma patients. Cancer Inform. 2008; 6:449-53. Papageorgio C, Harrison R, Rahmatpanah FB, Taylor K, Davis W, Caldwell CW. PMID: 19259422; PMCID: PMC2623312.
      View in: PubMed   Mentions: 1  
    29. Chromosomal localization of DNA methylation in small B-cell lymphoma. Leukemia. 2008 Mar; 22(3):638-41. Taylor KH, Rahmatpanah F, Davis JW, Caldwell CW. PMID: 17728784.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    30. Relational analysis of CpG islands methylation and gene expression in human lymphomas using possibilistic C-means clustering and modified cluster fuzzy density. IEEE/ACM Trans Comput Biol Bioinform. 2007 Apr-Jun; 4(2):176-89. Sjahputera O, Keller JM, Davis JW, Taylor KH, Rahmatpanah F, Shi H, Anderson DT, Blisard SN, Luke RH, Popescu M, Arthur GC, Caldwell CW. PMID: 17473312.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    31. Large-scale CpG methylation analysis identifies novel candidate genes and reveals methylation hotspots in acute lymphoblastic leukemia. Cancer Res. 2007 Mar 15; 67(6):2617-25. Taylor KH, Pena-Hernandez KE, Davis JW, Arthur GL, Duff DJ, Shi H, Rahmatpanah FB, Sjahputera O, Caldwell CW. PMID: 17363581.
      View in: PubMed   Mentions: 66     Fields:    Translation:HumansCells
    32. Differential DNA methylation patterns of small B-cell lymphoma subclasses with different clinical behavior. Leukemia. 2006 Oct; 20(10):1855-62. Rahmatpanah FB, Carstens S, Guo J, Sjahputera O, Taylor KH, Duff D, Shi H, Davis JW, Hooshmand SI, Chitma-Matsiga R, Caldwell CW. PMID: 16900213.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansCells
    33. Discovery of novel epigenetic markers in non-Hodgkin's lymphoma. Carcinogenesis. 2007 Jan; 28(1):60-70. Shi H, Guo J, Duff DJ, Rahmatpanah F, Chitima-Matsiga R, Al-Kuhlani M, Taylor KH, Sjahputera O, Andreski M, Wooldridge JE, Caldwell CW. PMID: 16774933.
      View in: PubMed   Mentions: 39     Fields:    Translation:HumansCells
    34. Differential DNA methylation of gene promoters in small B-cell lymphomas. Am J Clin Pathol. 2005 Sep; 124(3):430-9. Guo J, Burger M, Nimmrich I, Maier S, Becker E, Genc B, Duff D, Rahmatpanah F, Chitma-Matsiga R, Shi H, Berlin K, Huang TH, Caldwell CW. PMID: 16191512.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    35. Double RNA interference of DNMT3b and DNMT1 enhances DNA demethylation and gene reactivation. Cancer Res. 2003 Oct 01; 63(19):6110-5. Leu YW, Rahmatpanah F, Shi H, Wei SH, Liu JC, Yan PS, Huang TH. PMID: 14559786.
      View in: PubMed   Mentions: 43     Fields:    Translation:HumansCells
    36. Differential distribution of DNA methylation within the RASSF1A CpG island in breast cancer. Cancer Res. 2003 Oct 01; 63(19):6178-86. Yan PS, Shi H, Rahmatpanah F, Hsiau TH, Hsiau AH, Leu YW, Liu JC, Huang TH. PMID: 14559801.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansCells
    37. Triple analysis of the cancer epigenome: an integrated microarray system for assessing gene expression, DNA methylation, and histone acetylation. Cancer Res. 2003 May 01; 63(9):2164-71. Shi H, Wei SH, Leu YW, Rahmatpanah F, Liu JC, Yan PS, Nephew KP, Huang TH. PMID: 12727835.
      View in: PubMed   Mentions: 35     Fields:    Translation:HumansCells
    38. Applications of CpG island microarrays for high-throughput analysis of DNA methylation. J Nutr. 2002 08; 132(8 Suppl):2430S-2434S. Yan PS, Chen CM, Shi H, Rahmatpanah F, Wei SH, Huang TH. PMID: 12163706.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    39. Methylation microarray analysis of late-stage ovarian carcinomas distinguishes progression-free survival in patients and identifies candidate epigenetic markers. Clin Cancer Res. 2002 Jul; 8(7):2246-52. Wei SH, Chen CM, Strathdee G, Harnsomburana J, Shyu CR, Rahmatpanah F, Shi H, Ng SW, Yan PS, Nephew KP, Brown R, Huang TH. PMID: 12114427.
      View in: PubMed   Mentions: 69     Fields:    Translation:HumansCells
    40. Expressed CpG island sequence tag microarray for dual screening of DNA hypermethylation and gene silencing in cancer cells. Cancer Res. 2002 Jun 01; 62(11):3214-20. Shi H, Yan PS, Chen CM, Rahmatpanah F, Lofton-Day C, Caldwell CW, Huang TH. PMID: 12036936.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    41. Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays. Cancer Res. 2001 Dec 01; 61(23):8375-80. Yan PS, Chen CM, Shi H, Rahmatpanah F, Wei SH, Caldwell CW, Huang TH. PMID: 11731411.
      View in: PubMed   Mentions: 69     Fields:    Translation:HumansCells
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