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Effect of knocking out mouse Slc44a4 on colonic uptake of the microbiota-generated thiamine pyrophosphate and colon physiology. Am J Physiol Gastrointest Liver Physiol. 2024 Jul 01; 327(1):G36-G46.
Sabui S, Anthonymuthu S, Ramamoorthy K, Skupsky J, Jennings TSK, Rahmatpanah F, Fleckenstein JM, Said HM. PMID: 38713615; PMCID: PMC11376973.
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PubMed Mentions: Fields:
Translation:
HumansAnimals
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Changes in the innate immune response to SARS-CoV-2 with advancing age in humans. Immun Ageing. 2024 Mar 21; 21(1):21.
Agrawal S, Tran MT, Jennings TSK, Soliman MMH, Heo S, Sasson B, Rahmatpanah F, Agrawal A. PMID: 38515147; PMCID: PMC10956333.
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PubMed Mentions:
2
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Endogenous Retrovirus RNA Expression Differences between Race, Stage and HPV Status Offer Improved Prognostication among Women with Cervical Cancer. Int J Mol Sci. 2023 Jan 12; 24(2).
Alldredge J, Kumar V, Nguyen J, Sanders BE, Gomez K, Jayachandran K, Zhang J, Schwarz J, Rahmatpanah F. PMID: 36675007; PMCID: PMC9864224.
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PubMed Mentions: Fields:
Translation:
HumansCells
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Spatial Profiling of the Prostate Cancer Tumor Microenvironment Reveals Multiple Differences in Gene Expression and Correlation with Recurrence Risk. Cancers (Basel). 2022 Oct 08; 14(19).
Kumar V, Randhawa P, Bilodeau R, Mercola D, McClelland M, Agrawal A, Nguyen J, Castro P, Ittmann MM, Rahmatpanah F. PMID: 36230846; PMCID: PMC9562240.
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PubMed Mentions:
2
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Expression of Endogenous Retroviral RNA in Prostate Tumors has Prognostic Value and Shows Differences among Americans of African Versus European/Middle Eastern Ancestry. Cancers (Basel). 2021 Dec 17; 13(24).
Kumar V, McClelland M, Nguyen J, De Robles G, Ittmann M, Castro P, Mercola D, Jia Z, Rahmatpanah F. PMID: 34944967; PMCID: PMC8699453.
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PubMed Mentions:
3
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Editorial: Therapeutic Opportunities and Innovative Biomarkers in Tumor Microenvironment. Front Oncol. 2021; 11:803414.
Xu K, Rahmatpanah F, Jia Z. PMID: 34917516; PMCID: PMC8669590.
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PubMed Mentions:
2
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Vitamin C Enhances Antiviral Functions of Lung Epithelial Cells. Biomolecules. 2021 08 03; 11(8).
Teafatiller T, Agrawal S, De Robles G, Rahmatpanah F, Subramanian VS, Agrawal A. PMID: 34439814; PMCID: PMC8394979.
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PubMed Mentions:
11 Fields:
Translation:
HumansAnimalsCells
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RNA expression differences in prostate tumors and tumor-adjacent stroma between Black and White Americans. Oncotarget. 2021 Jul 20; 12(15):1457-1469.
Rahmatpanah F, Robles G, Lilly M, Keane T, Kumar V, Mercola D, Randhawa P, McClelland M. PMID: 34316327; PMCID: PMC8310667.
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PubMed Mentions:
10 Fields:
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Transcriptome Analysis of Ovarian and Uterine Clear Cell Malignancies. Front Oncol. 2020; 10:598579.
Alldredge J, Randall L, De Robles G, Agrawal A, Mercola D, Liu M, Randhawa P, Edwards R, McClelland M, Rahmatpanah F. PMID: 33415077; PMCID: PMC7784081.
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PubMed Mentions:
10
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Correction: Airway epithelial cells prime plasmacytoid dendritic cells to respond to pathogens via secretion of growth factors. Mucosal Immunol. 2019 05; 12(3):841.
Rahmatpanah F, Agrawal S, Jaiswal N, Nguyen HM, McClelland M, Agrawal A. PMID: 30705377; PMCID: PMC7608114.
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PubMed Mentions: Fields:
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Transcriptional Profiling of Age-Associated Gene Expression Changes in Human Circulatory CD1c+ Myeloid Dendritic Cell Subset. J Gerontol A Biol Sci Med Sci. 2019 01 01; 74(1):9-15.
Rahmatpanah F, Agrawal S, Scarfone VM, Kapadia S, Mercola D, Agrawal A. PMID: 29718193; PMCID: PMC6298184.
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PubMed Mentions:
18 Fields:
Translation:
HumansCells
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Airway epithelial cells prime plasmacytoid dendritic cells to respond to pathogens via secretion of growth factors. Mucosal Immunol. 2019 01; 12(1):77-84.
Rahmatpanah F, Agrawal S, Jaiswal N, Nguyen HM, McClelland M, Agrawal A. PMID: 30279511; PMCID: PMC6301110.
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PubMed Mentions:
15 Fields:
Translation:
HumansCells
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Airway epithelial cells enhance the immunogenicity of human myeloid dendritic cells under steady state. Clin Exp Immunol. 2017 09; 189(3):279-289.
Agrawal S, Srivastava R, Rahmatpanah F, Madiraju C, BenMohamed L, Agrawal A. PMID: 28470729; PMCID: PMC5543474.
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PubMed Mentions:
5 Fields:
Translation:
HumansAnimalsCells
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Correction: Overexpression of periostin in stroma positively associated with aggressive prostate cancer. PLoS One. 2015; 10(6):e0130333.
Tian Y, Choi CH, Li QK, Rahmatpanah FB, Chen X, Kim SR, Veltri R, Chia D, Zhang Z, Mercola D, Zhang H. PMID: 26043260; PMCID: PMC4456420.
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PubMed Mentions:
1 Fields:
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Overexpression of periostin in stroma positively associated with aggressive prostate cancer. PLoS One. 2015; 10(3):e0121502.
Tian Y, Choi CH, Li QK, Rahmatpanah FB, Chen X, Kim SR, Veltri R, Chia D, Zhang Z, Mercola D, Zhang H. PMID: 25781169; PMCID: PMC4362940.
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PubMed Mentions:
23 Fields:
Translation:
HumansCells
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The identification of trans-associations between prostate cancer GWAS SNPs and RNA expression differences in tumor-adjacent stroma. Oncotarget. 2015 Jan 30; 6(3):1865-73.
Chen X, McClelland M, Jia Z, Rahmatpanah FB, Sawyers A, Trent J, Duggan D, Mercola D. PMID: 25638161; PMCID: PMC4359337.
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PubMed Mentions:
5 Fields:
Translation:
Humans
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A class of genes in the HER2 regulon that is poised for transcription in breast cancer cell lines and expressed in human breast tumors. Oncotarget. 2015 Jan 20; 6(2):1286-301.
Rahmatpanah FB, Jia Z, Chen X, Char JE, Men B, Franke AC, Jones FE, McClelland M, Mercola D. PMID: 25428913; PMCID: PMC4359233.
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PubMed Mentions:
4 Fields:
Translation:
HumansCells
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Role of the adjacent stroma cells in prostate cancer development and progression: synergy between TGF-β and IGF signaling. Biomed Res Int. 2014; 2014:502093.
Lee C, Jia Z, Rahmatpanah F, Zhang Q, Zi X, McClelland M, Mercola D. PMID: 25089270; PMCID: PMC4095744.
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PubMed Mentions:
15 Fields:
Translation:
HumansAnimalsCells
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Expression differences between African American and Caucasian prostate cancer tissue reveals that stroma is the site of aggressive changes. Int J Cancer. 2014 Jan 01; 134(1):81-91.
Kinseth MA, Jia Z, Rahmatpanah F, Sawyers A, Sutton M, Wang-Rodriguez J, Mercola D, McGuire KL. PMID: 23754304; PMCID: PMC3800217.
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PubMed Mentions:
52 Fields:
Translation:
HumansCells
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An accurate prostate cancer prognosticator using a seven-gene signature plus Gleason score and taking cell type heterogeneity into account. PLoS One. 2012; 7(9):e45178.
Chen X, Xu S, McClelland M, Rahmatpanah F, Sawyers A, Jia Z, Mercola D. PMID: 23028830; PMCID: PMC3460942.
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PubMed Mentions:
25 Fields:
Translation:
HumansCells
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Expression changes in the stroma of prostate cancer predict subsequent relapse. PLoS One. 2012; 7(8):e41371.
Jia Z, Rahmatpanah FB, Chen X, Lernhardt W, Wang Y, Xia XQ, Sawyers A, Sutton M, McClelland M, Mercola D. PMID: 22870216; PMCID: PMC3411675.
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PubMed Mentions:
21 Fields:
Translation:
HumansCTClinical Trials
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TGF-β mediated DNA methylation in prostate cancer. Transl Androl Urol. 2012 Jun; 1(2):78-88.
Lee C, Zhang Q, Zi X, Dash A, Soares MB, Rahmatpanah F, Jia Z, McClelland M, Mercola D. PMID: 25133096; PMCID: PMC4131550.
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PubMed Mentions:
10
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Expression of HER2 in Breast Cancer Promotes a Massive Reorganization of Gene Activity and Suggests a Role for Epigenetic Regulation. J Data Mining Genomics Proteomics. 2012; 3.
Rahmatpanah F, Jia Z, Chen X, Jones FE, McClelland M, Mercola D. PMID: 24009986; PMCID: PMC3760961.
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PubMed Mentions:
2
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Diagnosis of prostate cancer using differentially expressed genes in stroma. Cancer Res. 2011 Apr 01; 71(7):2476-87.
Jia Z, Wang Y, Sawyers A, Yao H, Rahmatpanah F, Xia XQ, Xu Q, Pio R, Turan T, Koziol JA, Goodison S, Carpenter P, Wang-Rodriguez J, Simoneau A, Meyskens F, Sutton M, Lernhardt W, Beach T, Monforte J, McClelland M, Mercola D. PMID: 21459804; PMCID: PMC3071046.
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PubMed Mentions:
62 Fields:
Translation:
HumansCells
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Epigenetic regulation of WNT signaling in chronic lymphocytic leukemia. Epigenomics. 2010 Feb 01; 2(1):53-70.
Bennett LB, Taylor KH, Arthur GL, Rahmatpanah FB, Hooshmand SI, Caldwell CW. PMID: 20473358; PMCID: PMC2869094.
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PubMed Mentions:
10 Fields:
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Hypermethylation of the DLC1 CpG island does not alter gene expression in canine lymphoma. BMC Genet. 2009 Nov 13; 10:73.
Bryan JN, Jabbes M, Berent LM, Arthur GL, Taylor KH, Rissetto KC, Henry CJ, Rahmatpanah F, Rankin WV, Villamil JA, Lewis MR, Caldwell CW. PMID: 19912643; PMCID: PMC2784477.
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PubMed Mentions:
14 Fields:
Translation:
HumansAnimalsCells
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Large-scale analysis of DNA methylation in chronic lymphocytic leukemia. Epigenomics. 2009 Oct; 1(1):39-61.
Rahmatpanah FB, Carstens S, Hooshmand SI, Welsh EC, Sjahputera O, Taylor KH, Bennett LB, Shi H, Davis JW, Arthur GL, Shanafelt TD, Kay NE, Wooldridge JE, Caldwell CW. PMID: 20495622; PMCID: PMC2872502.
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PubMed Mentions:
24 Fields:
Translation:
HumansCells
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Algorithmic discovery of methylation "hot spots" in DNA from lymphoma patients. Cancer Inform. 2008; 6:449-53.
Papageorgio C, Harrison R, Rahmatpanah FB, Taylor K, Davis W, Caldwell CW. PMID: 19259422; PMCID: PMC2623312.
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PubMed Mentions:
1
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Chromosomal localization of DNA methylation in small B-cell lymphoma. Leukemia. 2008 Mar; 22(3):638-41.
Taylor KH, Rahmatpanah F, Davis JW, Caldwell CW. PMID: 17728784.
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PubMed Mentions:
1 Fields:
Translation:
HumansCells
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Relational analysis of CpG islands methylation and gene expression in human lymphomas using possibilistic C-means clustering and modified cluster fuzzy density. IEEE/ACM Trans Comput Biol Bioinform. 2007 Apr-Jun; 4(2):176-89.
Sjahputera O, Keller JM, Davis JW, Taylor KH, Rahmatpanah F, Shi H, Anderson DT, Blisard SN, Luke RH, Popescu M, Arthur GC, Caldwell CW. PMID: 17473312.
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PubMed Mentions:
2 Fields:
Translation:
HumansCells
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Large-scale CpG methylation analysis identifies novel candidate genes and reveals methylation hotspots in acute lymphoblastic leukemia. Cancer Res. 2007 Mar 15; 67(6):2617-25.
Taylor KH, Pena-Hernandez KE, Davis JW, Arthur GL, Duff DJ, Shi H, Rahmatpanah FB, Sjahputera O, Caldwell CW. PMID: 17363581.
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PubMed Mentions:
66 Fields:
Translation:
HumansCells
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Differential DNA methylation patterns of small B-cell lymphoma subclasses with different clinical behavior. Leukemia. 2006 Oct; 20(10):1855-62.
Rahmatpanah FB, Carstens S, Guo J, Sjahputera O, Taylor KH, Duff D, Shi H, Davis JW, Hooshmand SI, Chitma-Matsiga R, Caldwell CW. PMID: 16900213.
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PubMed Mentions:
36 Fields:
Translation:
HumansCells
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Discovery of novel epigenetic markers in non-Hodgkin's lymphoma. Carcinogenesis. 2007 Jan; 28(1):60-70.
Shi H, Guo J, Duff DJ, Rahmatpanah F, Chitima-Matsiga R, Al-Kuhlani M, Taylor KH, Sjahputera O, Andreski M, Wooldridge JE, Caldwell CW. PMID: 16774933.
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PubMed Mentions:
39 Fields:
Translation:
HumansCells
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Differential DNA methylation of gene promoters in small B-cell lymphomas. Am J Clin Pathol. 2005 Sep; 124(3):430-9.
Guo J, Burger M, Nimmrich I, Maier S, Becker E, Genc B, Duff D, Rahmatpanah F, Chitma-Matsiga R, Shi H, Berlin K, Huang TH, Caldwell CW. PMID: 16191512.
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PubMed Mentions:
11 Fields:
Translation:
HumansCells
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Double RNA interference of DNMT3b and DNMT1 enhances DNA demethylation and gene reactivation. Cancer Res. 2003 Oct 01; 63(19):6110-5.
Leu YW, Rahmatpanah F, Shi H, Wei SH, Liu JC, Yan PS, Huang TH. PMID: 14559786.
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PubMed Mentions:
43 Fields:
Translation:
HumansCells
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Differential distribution of DNA methylation within the RASSF1A CpG island in breast cancer. Cancer Res. 2003 Oct 01; 63(19):6178-86.
Yan PS, Shi H, Rahmatpanah F, Hsiau TH, Hsiau AH, Leu YW, Liu JC, Huang TH. PMID: 14559801.
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PubMed Mentions:
41 Fields:
Translation:
HumansCells
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Triple analysis of the cancer epigenome: an integrated microarray system for assessing gene expression, DNA methylation, and histone acetylation. Cancer Res. 2003 May 01; 63(9):2164-71.
Shi H, Wei SH, Leu YW, Rahmatpanah F, Liu JC, Yan PS, Nephew KP, Huang TH. PMID: 12727835.
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PubMed Mentions:
35 Fields:
Translation:
HumansCells
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Applications of CpG island microarrays for high-throughput analysis of DNA methylation. J Nutr. 2002 08; 132(8 Suppl):2430S-2434S.
Yan PS, Chen CM, Shi H, Rahmatpanah F, Wei SH, Huang TH. PMID: 12163706.
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PubMed Mentions:
29 Fields:
Translation:
HumansCells
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Methylation microarray analysis of late-stage ovarian carcinomas distinguishes progression-free survival in patients and identifies candidate epigenetic markers. Clin Cancer Res. 2002 Jul; 8(7):2246-52.
Wei SH, Chen CM, Strathdee G, Harnsomburana J, Shyu CR, Rahmatpanah F, Shi H, Ng SW, Yan PS, Nephew KP, Brown R, Huang TH. PMID: 12114427.
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PubMed Mentions:
69 Fields:
Translation:
HumansCells
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Expressed CpG island sequence tag microarray for dual screening of DNA hypermethylation and gene silencing in cancer cells. Cancer Res. 2002 Jun 01; 62(11):3214-20.
Shi H, Yan PS, Chen CM, Rahmatpanah F, Lofton-Day C, Caldwell CW, Huang TH. PMID: 12036936.
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PubMed Mentions:
19 Fields:
Translation:
HumansCells
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Dissecting complex epigenetic alterations in breast cancer using CpG island microarrays. Cancer Res. 2001 Dec 01; 61(23):8375-80.
Yan PS, Chen CM, Shi H, Rahmatpanah F, Wei SH, Caldwell CW, Huang TH. PMID: 11731411.
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PubMed Mentions:
69 Fields:
Translation:
HumansCells