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Allison, Steven D.

Title(s)Associate Professor, Ecology & Evolutionary Biology
Phone(949) 824-2341
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Allison SD. Traits track taxonomy. Nat Ecol Evol. 2019 Jul; 3(7):1001-1002. PMID: 31209291.
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    2. Isobe K, Allison SD, Khalili B, Martiny AC, Martiny JBH. Phylogenetic conservation of bacterial responses to soil nitrogen addition across continents. Nat Commun. 2019 06 07; 10(1):2499. PMID: 31175309.
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    3. Wang B, Brewer PE, Shugart HH, Lerdau MT, Allison SD. Building bottom-up aggregate-based models (ABMs) in soil systems with a view of aggregates as biogeochemical reactors. Glob Chang Biol. 2019 Aug; 25(8):e6-e8. PMID: 31087714.
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    4. Li J, Wang G, Mayes MA, Allison SD, Frey SD, Shi Z, Hu XM, Luo Y, Melillo JM. Reduced carbon use efficiency and increased microbial turnover with soil warming. Glob Chang Biol. 2019 03; 25(3):900-910. PMID: 30417564.
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    5. Wang B, Brewer PE, Shugart HH, Lerdau MT, Allison SD. Soil aggregates as biogeochemical reactors and implications for soil-atmosphere exchange of greenhouse gases-A concept. Glob Chang Biol. 2019 02; 25(2):373-385. PMID: 30412646.
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    6. Treseder KK, Berlemont R, Allison SD, Martiny AC. Drought increases the frequencies of fungal functional genes related to carbon and nitrogen acquisition. PLoS One. 2018; 13(11):e0206441. PMID: 30462680.
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    7. Glassman SI, Weihe C, Li J, Albright MBN, Looby CI, Martiny AC, Treseder KK, Allison SD, Martiny JBH. Decomposition responses to climate depend on microbial community composition. Proc Natl Acad Sci U S A. 2018 11 20; 115(47):11994-11999. PMID: 30397146.
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    8. Chase AB, Gomez-Lunar Z, Lopez AE, Li J, Allison SD, Martiny AC, Martiny JBH. Emergence of soil bacterial ecotypes along a climate gradient. Environ Microbiol. 2018 Nov; 20(11):4112-4126. PMID: 30209883.
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    9. Baker NR, Khalili B, Martiny JBH, Allison SD. Microbial decomposers not constrained by climate history along a Mediterranean climate gradient in southern California. Ecology. 2018 Jun; 99(6):1441-1452. PMID: 29663355.
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    10. Allison SD, Romero-Olivares AL, Lu Y, Taylor JW, Treseder KK. Temperature sensitivities of extracellular enzyme Vmax and Km across thermal environments. Glob Chang Biol. 2018 07; 24(7):2884-2897. PMID: 29322601.
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    11. Romero-Olivares AL, Allison SD, Treseder KK. Decomposition of recalcitrant carbon under experimental warming in boreal forest. PLoS One. 2017; 12(6):e0179674. PMID: 28622366.
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    12. Dolan KL, Peña J, Allison SD, Martiny JB. Phylogenetic conservation of substrate use specialization in leaf litter bacteria. PLoS One. 2017; 12(3):e0174472. PMID: 28358894.
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    13. Carey JC, Tang J, Templer PH, Kroeger KD, Crowther TW, Burton AJ, Dukes JS, Emmett B, Frey SD, Heskel MA, Jiang L, Machmuller MB, Mohan J, Panetta AM, Reich PB, Reinsch S, Wang X, Allison SD, Bamminger C, Bridgham S, Collins SL, de Dato G, Eddy WC, Enquist BJ, Estiarte M, Harte J, Henderson A, Johnson BR, Larsen KS, Luo Y, Marhan S, Melillo JM, Peñuelas J, Pfeifer-Meister L, Poll C, Rastetter E, Reinmann AB, Reynolds LL, Schmidt IK, Shaver GR, Strong AL, Suseela V, Tietema A. Temperature response of soil respiration largely unaltered with experimental warming. Proc Natl Acad Sci U S A. 2016 11 29; 113(48):13797-13802. PMID: 27849609.
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    14. Martiny JB, Martiny AC, Weihe C, Lu Y, Berlemont R, Brodie EL, Goulden ML, Treseder KK, Allison SD. Microbial legacies alter decomposition in response to simulated global change. ISME J. 2017 02; 11(2):490-499. PMID: 27740610.
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    15. He Y, Trumbore SE, Torn MS, Harden JW, Vaughn LJ, Allison SD, Randerson JT. Radiocarbon constraints imply reduced carbon uptake by soils during the 21st century. Science. 2016 09 23; 353(6306):1419-1424. PMID: 27708036.
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    16. Sistla SA, Roddy AB, Williams NE, Kramer DB, Stevens K, Allison SD. Agroforestry Practices Promote Biodiversity and Natural Resource Diversity in Atlantic Nicaragua. PLoS One. 2016; 11(9):e0162529. PMID: 27606619.
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    17. Evans S, Martiny JB, Allison SD. Effects of dispersal and selection on stochastic assembly in microbial communities. ISME J. 2017 01; 11(1):176-185. PMID: 27494293.
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    18. Hynson NA, Allison SD, Treseder KK. Quantum Dots Reveal Shifts in Organic Nitrogen Uptake by Fungi Exposed to Long-Term Nitrogen Enrichment. PLoS One. 2015; 10(9):e0138158. PMID: 26367868.
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    19. Baker NR, Allison SD. Ultraviolet photodegradation facilitates microbial litter decomposition in a Mediterranean climate. Ecology. 2015 Jul; 96(7):1994-2003. PMID: 26378321.
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    20. Amend AS, Martiny AC, Allison SD, Berlemont R, Goulden ML, Lu Y, Treseder KK, Weihe C, Martiny JB. Microbial response to simulated global change is phylogenetically conserved and linked with functional potential. ISME J. 2016 Jan; 10(1):109-18. PMID: 26046258; PMCID: PMC4681869 [Available on 01/01/17].
    21. Matulich KL, Weihe C, Allison SD, Amend AS, Berlemont R, Goulden ML, Kimball S, Martiny AC, Martiny JB. Temporal variation overshadows the response of leaf litter microbial communities to simulated global change. ISME J. 2015 Nov; 9(11):2477-89. PMID: 25978544; PMCID: PMC4611511 [Available on 11/01/16].
    22. Berlemont R, Allison SD, Weihe C, Lu Y, Brodie EL, Martiny JB, Martiny AC. Cellulolytic potential under environmental changes in microbial communities from grassland litter. Front Microbiol. 2014; 5:639. PMID: 25505459; PMCID: PMC4243572.
    23. Allison SD. Modeling adaptation of carbon use efficiency in microbial communities. Front Microbiol. 2014; 5:571. PMID: 25389423.
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    24. Allison SD, Lu L, Kent AG, Martiny AC. Extracellular enzyme production and cheating in Pseudomonas fluorescens depend on diffusion rates. Front Microbiol. 2014; 5:169. PMID: 24782855.
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    25. Zimmerman AE, Allison SD, Martiny AC. Phylogenetic constraints on elemental stoichiometry and resource allocation in heterotrophic marine bacteria. Environ Microbiol. 2014 May; 16(5):1398-410. PMID: 24237481.
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    26. Aronson EL, Allison SD, Helliker BR. Environmental impacts on the diversity of methane-cycling microbes and their resultant function. Front Microbiol. 2013; 4:225. PMID: 23966984.
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    27. McGuire KL, Allison SD, Fierer N, Treseder KK. Ectomycorrhizal-dominated boreal and tropical forests have distinct fungal communities, but analogous spatial patterns across soil horizons. PLoS One. 2013; 8(7):e68278. PMID: 23874569.
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    28. Allison SD, Lu Y, Weihe C, Goulden ML, Martiny AC, Treseder KK, Martiny JB. Microbial abundance and composition influence litter decomposition response to environmental change. Ecology. 2013 Mar; 94(3):714-25. PMID: 23687897.
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    29. Zimmerman AE, Martiny AC, Allison SD. Microdiversity of extracellular enzyme genes among sequenced prokaryotic genomes. ISME J. 2013 Jun; 7(6):1187-99. PMID: 23303371.
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    30. Shade A, Peter H, Allison SD, Baho DL, Berga M, Bürgmann H, Huber DH, Langenheder S, Lennon JT, Martiny JB, Matulich KL, Schmidt TM, Handelsman J. Fundamentals of microbial community resistance and resilience. Front Microbiol. 2012; 3:417. PMID: 23267351.
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    31. Folse HJ, Allison SD. Cooperation, competition, and coalitions in enzyme-producing microbes: social evolution and nutrient depolymerization rates. Front Microbiol. 2012; 3:338. PMID: 23060866.
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    32. Allison SD, Chao Y, Farrara JD, Hatosy S, Martiny AC. Fine-scale temporal variation in marine extracellular enzymes of coastal southern california. Front Microbiol. 2012; 3:301. PMID: 22912628.
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    33. Aronson EL, Allison SD. Meta-analysis of environmental impacts on nitrous oxide release in response to N amendment. Front Microbiol. 2012; 3:272. PMID: 22866053.
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    34. Allison SD. A trait-based approach for modelling microbial litter decomposition. Ecol Lett. 2012 Sep; 15(9):1058-70. PMID: 22642621.
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    35. German DP, Chacon SS, Allison SD. Substrate concentration and enzyme allocation can affect rates of microbial decomposition. Ecology. 2011 Jul; 92(7):1471-80. PMID: 21870621.
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    36. Martiny JB, Eisen JA, Penn K, Allison SD, Horner-Devine MC. Drivers of bacterial beta-diversity depend on spatial scale. Proc Natl Acad Sci U S A. 2011 May 10; 108(19):7850-4. PMID: 21518859.
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    37. McGuire KL, Bent E, Borneman J, Majumder A, Allison SD, Tresederi KK. Functional diversity in resource use by fungi. Ecology. 2010 Aug; 91(8):2324-32. PMID: 20836454.
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    38. Sinsabaugh RL, Lauber CL, Weintraub MN, Ahmed B, Allison SD, Crenshaw C, Contosta AR, Cusack D, Frey S, Gallo ME, Gartner TB, Hobbie SE, Holland K, Keeler BL, Powers JS, Stursova M, Takacs-Vesbach C, Waldrop MP, Wallenstein MD, Zak DR, Zeglin LH. Stoichiometry of soil enzyme activity at global scale. Ecol Lett. 2008 Nov; 11(11):1252-1264. PMID: 18823393.
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    39. Allison SD, Martiny JB. Colloquium paper: resistance, resilience, and redundancy in microbial communities. Proc Natl Acad Sci U S A. 2008 Aug 12; 105 Suppl 1:11512-9. PMID: 18695234.
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    40. Cornwell WK, Cornelissen JH, Amatangelo K, Dorrepaal E, Eviner VT, Godoy O, Hobbie SE, Hoorens B, Kurokawa H, Pérez-Harguindeguy N, Quested HM, Santiago LS, Wardle DA, Wright IJ, Aerts R, Allison SD, van Bodegom P, Brovkin V, Chatain A, Callaghan TV, Díaz S, Garnier E, Gurvich DE, Kazakou E, Klein JA, Read J, Reich PB, Soudzilovskaia NA, Vaieretti MV, Westoby M. Plant species traits are the predominant control on litter decomposition rates within biomes worldwide. Ecol Lett. 2008 Oct; 11(10):1065-71. PMID: 18627410.
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    41. Allison S, Waldstreicher J. Why is most of the ground brown? Sci Am. 2006 Jul; 295(1):104. PMID: 16830687.
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    42. Allison SD. Brown ground: a soil carbon analogue for the green world hypothesis? Am Nat. 2006 May; 167(5):619-27. PMID: 16671007.
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    43. Allison SD, Schultz JC. Biochemical responses of chestnut oak to a galling cynipid. J Chem Ecol. 2005 Jan; 31(1):151-66. PMID: 15839487.
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    44. Allison SD, Vitousek PM. Rapid nutrient cycling in leaf litter from invasive plants in Hawai'i. Oecologia. 2004 Dec; 141(4):612-9. PMID: 15549401.
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    45. Allison SD, Schultz JC. Differential activity of peroxidase isozymes in response to wounding, gypsy moth, and plant hormones in northern red oak (Quercus rubra L.). J Chem Ecol. 2004 Jul; 30(7):1363-79. PMID: 15503525.
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    46. Vitousek PM, Hättenschwiler S, Olander L, Allison S. Nitrogen and nature. Ambio. 2002 Mar; 31(2):97-101. PMID: 12078015.
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