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Sandmeyer, Suzanne B

TitleProfessor
InstitutionUniversity of California, Irvine
DepartmentBiological Chemistry
Address1001 Health Sciences Road
CA 92697-3950
Phone(949) 824-7571
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    Collapse Research 
    Collapse Research Activities and Funding
    High-Throughput DNA Sequencer
    NIH S10OD021718Mar 15, 2016 - Mar 14, 2017
    Role: Principal Investigator
    PacBio RS Single Molecule, Real-Time (SMRT) DNA Sequencer
    NIH S10OD010794May 1, 2012 - Apr 30, 2013
    Role: Principal Investigator
    High Throughput DNA Sequencer
    NIH/NCRR S10RR025496May 1, 2009 - Apr 30, 2010
    Role: Principal Investigator
    Identification of Host Genes for Retroviral Replication
    NIH/NIGMS R21GM073052Sep 1, 2005 - Aug 31, 2008
    Role: Principal Investigator
    Ty3 Viruslike Particle Morphogenesis and Host Interactions
    NIH/NIGMS R01GM033281Apr 1, 1984 - Mar 31, 2014
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Patterson K, Yu J, Landberg J, Chang I, Shavarebi F, Bilanchone V, Sandmeyer S. FUNCTIONAL GENOMICS FOR THE OLEAGINOUS YEAST YARROWIA LIPOLYTICA. Metab Eng. 2018 May 21. PMID: 29792930.
      View in: PubMed
    2. Yu J, Landberg J, Shavarebi F, Bilanchone V, Okerlund A, Wanninayake U, Zhao L, Kraus G, Sandmeyer S. Bioengineering triacetic acid lactone production in Yarrowia lipolytica for pogostone synthesis. Biotechnol Bioeng. 2018 May 19. PMID: 29777591.
      View in: PubMed
    3. Rowley PA, Patterson K, Sandmeyer S, Sawyer SL. Control of yeast retrotransposons mediated through nucleoporin evolution. PLoS Genet. 2018 Apr; 14(4):e1007325. PMID: 29694349.
      View in: PubMed
    4. Magnan C, Yu J, Chang I, Jahn E, Kanomata Y, Wu J, Zeller M, Oakes M, Baldi P, Sandmeyer S. Sequence Assembly of Yarrowia lipolytica Strain W29/CLIB89 Shows Transposable Element Diversity. PLoS One. 2016; 11(9):e0162363. PMID: 27603307; PMCID: PMC5014426.
    5. Bilanchone V, Clemens K, Kaake R, Dawson AR, Matheos D, Nagashima K, Sitlani P, Patterson K, Chang I, Huang L, Sandmeyer S. Ty3 Retrotransposon Hijacks Mating Yeast RNA Processing Bodies to Infect New Genomes. PLoS Genet. 2015; 11(9):e1005528. PMID: 26421679; PMCID: PMC4589538.
    6. Sandmeyer S, Patterson K, Bilanchone V. Ty3, a Position-specific Retrotransposon in Budding Yeast. Microbiol Spectr. 2015 Apr; 3(2):MDNA3-0057-2014. PMID: 26104707.
      View in: PubMed
    7. Qi X, Vargas E, Larsen L, Knapp W, Hatfield GW, Lathrop R, Sandmeyer S. Directed DNA shuffling of retrovirus and retrotransposon integrase protein domains. PLoS One. 2013; 8(5):e63957. PMID: 23691126; PMCID: PMC3656877.
    8. Liu P, Chernyshov A, Najdi T, Fu Y, Dickerson J, Sandmeyer S, Jarboe L. Membrane stress caused by octanoic acid in Saccharomyces cerevisiae. Appl Microbiol Biotechnol. 2013 Apr; 97(7):3239-51. PMID: 23435986.
      View in: PubMed
    9. Shen MW, Fang F, Sandmeyer S, Da Silva NA. Development and characterization of a vector set with regulated promoters for systematic metabolic engineering in Saccharomyces cerevisiae. Yeast. 2012 Dec; 29(12):495-503. PMID: 23166051.
      View in: PubMed
    10. Clemens K, Bilanchone V, Beliakova-Bethell N, Larsen LS, Nguyen K, Sandmeyer S. Sequence requirements for localization and packaging of Ty3 retroelement RNA. Virus Res. 2013 Feb; 171(2):319-31. PMID: 23073180; PMCID: PMC3578171.
    11. Qi X, Sandmeyer S. In vitro targeting of strand transfer by the Ty3 retroelement integrase. J Biol Chem. 2012 May 25; 287(22):18589-95. PMID: 22493285; PMCID: PMC3365781.
    12. Qi X, Daily K, Nguyen K, Wang H, Mayhew D, Rigor P, Forouzan S, Johnston M, Mitra RD, Baldi P, Sandmeyer S. Retrotransposon profiling of RNA polymerase III initiation sites. Genome Res. 2012 Apr; 22(4):681-92. PMID: 22287102; PMCID: PMC3317150.
    13. Clemens K, Larsen L, Zhang M, Kuznetsov Y, Bilanchone V, Randall A, Harned A, Dasilva R, Nagashima K, McPherson A, Baldi P, Sandmeyer S. The TY3 Gag3 spacer controls intracellular condensation and uncoating. J Virol. 2011 Apr; 85(7):3055-66. PMID: 21270167; PMCID: PMC3067838.
    14. Sandmeyer S, Clemens KA. Function of a retrotransposon nucleocapsid protein. RNA Biol. 2010 Nov-Dec; 7(6):642-54. PMID: 21189452; PMCID: PMC3073325.
    15. Fang F, Salmon K, Shen MW, Aeling KA, Ito E, Irwin B, Tran UP, Hatfield GW, Da Silva NA, Sandmeyer S. A vector set for systematic metabolic engineering in Saccharomyces cerevisiae. Yeast. 2011 Feb; 28(2):123-36. PMID: 20936606; PMCID: PMC3070743.
    16. Zhang M, Larsen LS, Irwin B, Bilanchone V, Sandmeyer S. Two-hybrid analysis of Ty3 capsid subdomain interactions. Mob DNA. 2010 May 05; 1(1):14. PMID: 20444245; PMCID: PMC2878294.
    17. Beliakova-Bethell N, Terry LJ, Bilanchone V, DaSilva R, Nagashima K, Wente SR, Sandmeyer S. Ty3 nuclear entry is initiated by viruslike particle docking on GLFG nucleoporins. J Virol. 2009 Nov; 83(22):11914-25. PMID: 19759143; PMCID: PMC2772691.
    18. Larsen LS, Beliakova-Bethell N, Bilanchone V, Zhang M, Lamsa A, Dasilva R, Hatfield GW, Nagashima K, Sandmeyer S. Ty3 nucleocapsid controls localization of particle assembly. J Virol. 2008 Mar; 82(5):2501-14. PMID: 18094177; PMCID: PMC2258933.
    19. Larsen LS, Kuznetsov Y, McPherson A, Hatfield GW, Sandmeyer S. TY3 GAG3 protein forms ordered particles in Escherichia coli. Virology. 2008 Jan 20; 370(2):223-7. PMID: 17964628; PMCID: PMC2701475.
    20. Larsen LS, Zhang M, Beliakova-Bethell N, Bilanchone V, Lamsa A, Nagashima K, Najdi R, Kosaka K, Kovacevic V, Cheng J, Baldi P, Hatfield GW, Sandmeyer S. Ty3 capsid mutations reveal early and late functions of the amino-terminal domain. J Virol. 2007 Jul; 81(13):6957-72. PMID: 17442718; PMCID: PMC1933270.
    21. Beliakova-Bethell N, Beckham C, Giddings TH, Winey M, Parker R, Sandmeyer S. Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components. RNA. 2006 Jan; 12(1):94-101. PMID: 16373495; PMCID: PMC1370889.
    22. Kuznetsov YG, Zhang M, Menees TM, McPherson A, Sandmeyer S. Investigation by atomic force microscopy of the structure of Ty3 retrotransposon particles. J Virol. 2005 Jul; 79(13):8032-45. PMID: 15956549; PMCID: PMC1143757.
    23. Irwin B, Aye M, Baldi P, Beliakova-Bethell N, Cheng H, Dou Y, Liou W, Sandmeyer S. Retroviruses and yeast retrotransposons use overlapping sets of host genes. Genome Res. 2005 May; 15(5):641-54. PMID: 15837808; PMCID: PMC1088292.
    24. Aye M, Irwin B, Beliakova-Bethell N, Chen E, Garrus J, Sandmeyer S. Host factors that affect Ty3 retrotransposition in Saccharomyces cerevisiae. Genetics. 2004 Nov; 168(3):1159-76. PMID: 15579677; PMCID: PMC1448793.
    25. Aye M, Sandmeyer S. Ty3 requires yeast La homologous protein for wild-type frequencies of transposition. Mol Microbiol. 2003 Jul; 49(2):501-15. PMID: 12828645.
      View in: PubMed
    26. Sandmeyer S. Integration by design. Proc Natl Acad Sci U S A. 2003 May 13; 100(10):5586-8. PMID: 12732725; PMCID: PMC156243.
    27. Nagy A, Perrimon N, Sandmeyer S, Plasterk R. Tailoring the genome: the power of genetic approaches. Nat Genet. 2003 Mar; 33 Suppl:276-84. PMID: 12610537.
      View in: PubMed
    28. Yieh L, Hatzis H, Kassavetis G, Sandmeyer S. Mutational analysis of the transcription factor IIIB-DNA target of Ty3 retroelement integration. J Biol Chem. 2002 Jul 19; 277(29):25920-8. PMID: 11994300.
      View in: PubMed
    29. Nymark-McMahon MH, Beliakova-Bethell NS, Darlix JL, Le Grice SF, Sandmeyer S. Ty3 integrase is required for initiation of reverse transcription. J Virol. 2002 Mar; 76(6):2804-16. PMID: 11861848; PMCID: PMC135951.
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