Lan Huang

Title(s)Professor, Physiology and Biophysics
SchoolSchool of Medicine
Address1001 Health Sciences Road
Irvine CA 92697-3950
Phone(949) 824-8548
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    Collapse Research 
    Collapse Research Activities and Funding
    Structural dynamics and function of the COP9 signalosome
    NIH R01GM130144Sep 15, 2018 - Aug 31, 2022
    Role: Principal Investigator
    In Vivo Interactome and Dynamics of Cullin-Ring Ligases
    NIH R01GM106003Jul 1, 2013 - Dec 31, 2017
    Role: Principal Investigator
    Function and Regulation of the CSN in the NF-kB Activation Pathway
    NIH R21CA161807Jun 1, 2012 - Dec 31, 2014
    Role: Principal Investigator
    Purchase of LTQ-Orbitrap Hybrid Mass Spectrometer
    NIH S10RR023552Mar 1, 2007 - Feb 28, 2008
    Role: Principal Investigator
    Proteomics of the Proteasome Interacting Networks
    NIH R01GM074830Aug 1, 2005 - Jun 30, 2023
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. DSBSO-Based XL-MS Analysis of Breast Cancer PDX Tissues to Delineate Protein Interaction Network in Clinical Samples. J Proteome Res. 2024 Feb 09. Jiao F, Yu C, Wheat A, Chen L, Lih TM, Zhang H, Huang L. PMID: 38334954.
      View in: PubMed   Mentions:    Fields:    
    2. Proximity Labeling Expansion Microscopy (PL-ExM) resolves structure of the interactome. bioRxiv. 2023 Nov 13. Park S, Wang X, Li X, Huang X, Fong KC, Yu C, Tran AA, Scipioni L, Dai Z, Huang L, Shi X. PMID: 38014020; PMCID: PMC10680661.
      View in: PubMed   Mentions:
    3. The Hippo pathway noncanonically drives autophagy and cell survival in response to energy stress. Mol Cell. 2023 09 07; 83(17):3155-3170.e8. Seo G, Yu C, Han H, Xing L, Kattan RE, An J, Kizhedathu A, Yang B, Luo A, Buckle AL, Tifrea D, Edwards R, Huang L, Ju HQ, Wang W. PMID: 37595580; PMCID: PMC10568779.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    4. Mapping Pregnancy-dependent Sulfhydrome Unfolds Diverse Functions of Protein Sulfhydration in Human Uterine Artery. Endocrinology. 2023 08 01; 164(9). Bai J, Jiao F, Salmeron AG, Xu S, Xian M, Huang L, Chen DB. PMID: 37439247; PMCID: PMC10413431.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    5. New advances in cross-linking mass spectrometry toward structural systems biology. Curr Opin Chem Biol. 2023 10; 76:102357. Yu C, Huang L. PMID: 37406423.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    6. Adolescent exposure to low-dose THC disrupts energy balance and adipose organ homeostasis in adulthood. Cell Metab. 2023 07 11; 35(7):1227-1241.e7. Lin L, Jung KM, Lee HL, Le J, Colleluori G, Wood C, Palese F, Squire E, Ramirez J, Su S, Torrens A, Fotio Y, Tang L, Yu C, Yang Q, Huang L, DiPatrizio N, Jang C, Cinti S, Piomelli D. PMID: 37267956; PMCID: PMC10524841.
      View in: PubMed   Mentions: 4     Fields:    Translation:Animals
    7. Exploring an Alternative Cysteine-Reactive Chemistry to Enable Proteome-Wide PPI Analysis by Cross-Linking Mass Spectrometry. Anal Chem. 2023 01 31; 95(4):2532-2539. Jiao F, Salituro LJ, Yu C, Gutierrez CB, Rychnovsky SD, Huang L. PMID: 36652389; PMCID: PMC10284117.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    8. Discovery of compounds that reactivate p53 mutants in vitro and in vivo. Cell Chem Biol. 2022 09 15; 29(9):1381-1395.e13. Durairaj G, Demir Ö, Lim B, Baronio R, Tifrea D, Hall LV, DeForest JC, Lauinger L, Jebril Fallatah MM, Yu C, Bae H, Lin DW, Kim JK, Salehi F, Jang C, Qiao F, Lathrop RH, Huang L, Edwards R, Rychnovsky S, Amaro RE, Kaiser P. PMID: 35948006; PMCID: PMC9481737.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    9. Point-of-care COPD diagnostics: biomarkers, sampling, paper-based analytical devices, and perspectives. Analyst. 2022 Mar 28; 147(7):1273-1293. He G, Dong T, Yang Z, Branstad A, Huang L, Jiang Z. PMID: 35113085.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    10. Structure and conformational dynamics of Clostridioides difficile toxin A. Life Sci Alliance. 2022 06; 5(6). Chen B, Basak S, Chen P, Zhang C, Perry K, Tian S, Yu C, Dong M, Huang L, Bowen ME, Jin R. PMID: 35292538; PMCID: PMC8924006.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    11. Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis. Anal Chem. 2022 03 15; 94(10):4236-4242. Jiao F, Yu C, Wheat A, Wang X, Rychnovsky SD, Huang L. PMID: 35235311; PMCID: PMC9056026.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    12. Developing a Targeted Quantitative Strategy for Sulfoxide-Containing MS-Cleavable Cross-Linked Peptides to Probe Conformational Dynamics of Protein Complexes. Anal Chem. 2022 03 15; 94(10):4390-4398. Yu C, Wang X, Huang L. PMID: 35193351; PMCID: PMC9000990.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    13. The Hippo pathway kinases LATS1 and LATS2 attenuate cellular responses to heavy metals through phosphorylating MTF1. Nat Cell Biol. 2022 01; 24(1):74-87. Han H, Nakaoka HJ, Hofmann L, Zhou JJ, Yu C, Zeng L, Nan J, Seo G, Vargas RE, Yang B, Qi R, Bardwell L, Fishman DA, Cho KWY, Huang L, Luo R, Warrior R, Wang W. PMID: 35027733; PMCID: PMC9022944.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    14. The Ubiquitin Interacting Motif-Like Domain of Met4 Selectively Binds K48 Polyubiquitin Chains. Mol Cell Proteomics. 2022 01; 21(1):100175. Villamil M, Xiao W, Yu C, Huang L, Xu P, Kaiser P. PMID: 34763062; PMCID: PMC8693465.
      View in: PubMed   Mentions:    Fields:    Translation:AnimalsCells
    15. Developing a Bimolecular Affinity Purification Strategy to Isolate 26S Proteasome Holocomplexes for Complex-Centric Proteomic Analysis. Anal Chem. 2021 10 05; 93(39):13407-13413. Yu C, Wang X, Li W, Liu Y, Huang L. PMID: 34550675; PMCID: PMC8999942.
      View in: PubMed   Mentions: 2     Fields:    
    16. Anterograde regulation of mitochondrial genes and FGF21 signaling by hepatic LSD1. JCI Insight. 2021 09 08; 6(17). Cao Y, Tang L, Du K, Paraiso K, Sun Q, Liu Z, Ye X, Fang Y, Yuan F, Chen H, Chen Y, Wang X, Yu C, Blitz IL, Wang PH, Huang L, Cheng H, Lu X, Cho KW, Seldin M, Fang Z, Yang Q. PMID: 34314389; PMCID: PMC8492328.
      View in: PubMed   Mentions: 2     Fields:    Translation:AnimalsCells
    17. Protein interaction landscapes revealed by advanced in vivo cross-linking-mass spectrometry. Proc Natl Acad Sci U S A. 2021 08 10; 118(32). Wheat A, Yu C, Wang X, Burke AM, Chemmama IE, Kaake RM, Baker P, Rychnovsky SD, Yang J, Huang L. PMID: 34349018; PMCID: PMC8364181.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    18. Structural basis for CSPG4 as a receptor for TcdB and a therapeutic target in Clostridioides difficile infection. Nat Commun. 2021 06 18; 12(1):3748. Chen P, Zeng J, Liu Z, Thaker H, Wang S, Tian S, Zhang J, Tao L, Gutierrez CB, Xing L, Gerhard R, Huang L, Dong M, Jin R. PMID: 34145250; PMCID: PMC8213806.
      View in: PubMed   Mentions: 24     Fields:    Translation:AnimalsCells
    19. Enabling Photoactivated Cross-Linking Mass Spectrometric Analysis of Protein Complexes by Novel MS-Cleavable Cross-Linkers. Mol Cell Proteomics. 2021; 20:100084. Gutierrez C, Salituro LJ, Yu C, Wang X, DePeter SF, Rychnovsky SD, Huang L. PMID: 33915260; PMCID: PMC8214149.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    20. Quality-Control Mechanism for Telomerase RNA Folding in the Cell. Cell Rep. 2020 12 29; 33(13):108568. Hu X, Kim JK, Yu C, Jun HI, Liu J, Sankaran B, Huang L, Qiao F. PMID: 33378677.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    21. Proteomic profiling of the monothiol glutaredoxin Grx3 reveals its global role in the regulation of iron dependent processes. PLoS Genet. 2020 06; 16(6):e1008881. Alkafeef SS, Lane S, Yu C, Zhou T, Solis NV, Filler SG, Huang L, Liu H. PMID: 32525871; PMCID: PMC7319344.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimals
    22. Structural dynamics of the human COP9 signalosome revealed by cross-linking mass spectrometry and integrative modeling. Proc Natl Acad Sci U S A. 2020 02 25; 117(8):4088-4098. Gutierrez C, Chemmama IE, Mao H, Yu C, Echeverria I, Block SA, Rychnovsky SD, Zheng N, Sali A, Huang L. PMID: 32034103; PMCID: PMC7049115.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    23. Structure of the full-length Clostridium difficile toxin B. Nat Struct Mol Biol. 2019 08; 26(8):712-719. Chen P, Lam KH, Liu Z, Mindlin FA, Chen B, Gutierrez CB, Huang L, Zhang Y, Hamza T, Feng H, Matsui T, Bowen ME, Perry K, Jin R. PMID: 31308519; PMCID: PMC6684407.
      View in: PubMed   Mentions: 37     Fields:    Translation:Cells
    24. Human red and green cone opsins are O-glycosylated at an N-terminal Ser/Thr-rich domain conserved in vertebrates. J Biol Chem. 2019 05 17; 294(20):8123-8133. Salom D, Jin H, Gerken TA, Yu C, Huang L, Palczewski K. PMID: 30948514; PMCID: PMC6527158.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    25. Probing H2O2-mediated Structural Dynamics of the Human 26S Proteasome Using Quantitative Cross-linking Mass Spectrometry (QXL-MS). Mol Cell Proteomics. 2019 05; 18(5):954-967. Yu C, Wang X, Huszagh AS, Viner R, Novitsky E, Rychnovsky SD, Huang L. PMID: 30723094; PMCID: PMC6495261.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    26. Development of a Novel Sulfoxide-Containing MS-Cleavable Homobifunctional Cysteine-Reactive Cross-Linker for Studying Protein-Protein Interactions. Anal Chem. 2018 06 19; 90(12):7600-7607. Gutierrez CB, Block SA, Yu C, Soohoo SM, Huszagh AS, Rychnovsky SD, Huang L. PMID: 29792801; PMCID: PMC6037416.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    27. Wor1 establishes opaque cell fate through inhibition of the general co-repressor Tup1 in Candida albicans. PLoS Genet. 2018 01; 14(1):e1007176. Alkafeef SS, Yu C, Huang L, Liu H. PMID: 29337983; PMCID: PMC5786334.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    28. Dissecting Dynamic and Heterogeneous Proteasome Complexes Using In Vivo Cross-Linking-Assisted Affinity Purification and Mass Spectrometry. Methods Mol Biol. 2018; 1844:401-410. Wang X, Huang L. PMID: 30242723; PMCID: PMC6944201.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    29. Cross-Linking Mass Spectrometry: An Emerging Technology for Interactomics and Structural Biology. Anal Chem. 2018 01 02; 90(1):144-165. Yu C, Huang L. PMID: 29160693; PMCID: PMC6022837.
      View in: PubMed   Mentions: 119     Fields:    
    30. Structural Basis for Shelterin Bridge Assembly. Mol Cell. 2017 Nov 16; 68(4):698-714.e5. Kim JK, Liu J, Hu X, Yu C, Roskamp K, Sankaran B, Huang L, Komives EA, Qiao F. PMID: 29149597; PMCID: PMC5698806.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    31. The proteasome-interacting Ecm29 protein disassembles the 26S proteasome in response to oxidative stress. J Biol Chem. 2017 09 29; 292(39):16310-16320. Wang X, Chemmama IE, Yu C, Huszagh A, Xu Y, Viner R, Block SA, Cimermancic P, Rychnovsky SD, Ye Y, Sali A, Huang L. PMID: 28821611; PMCID: PMC5625060.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansCells
    32. Nuclear factor-erythroid-2 related transcription factor-1 (Nrf1) is regulated by O-GlcNAc transferase. Free Radic Biol Med. 2017 09; 110:196-205. Han JW, Valdez JL, Ho DV, Lee CS, Kim HM, Wang X, Huang L, Chan JY. PMID: 28625484.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    33. Molecular Details Underlying Dynamic Structures and Regulation of the Human 26S Proteasome. Mol Cell Proteomics. 2017 05; 16(5):840-854. Wang X, Cimermancic P, Yu C, Schweitzer A, Chopra N, Engel JL, Greenberg C, Huszagh AS, Beck F, Sakata E, Yang Y, Novitsky EJ, Leitner A, Nanni P, Kahraman A, Guo X, Dixon JE, Rychnovsky SD, Aebersold R, Baumeister W, Sali A, Huang L. PMID: 28292943; PMCID: PMC5417825.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    34. Developing a Multiplexed Quantitative Cross-Linking Mass Spectrometry Platform for Comparative Structural Analysis of Protein Complexes. Anal Chem. 2016 10 18; 88(20):10301-10308. Yu C, Huszagh A, Viner R, Novitsky EJ, Rychnovsky SD, Huang L. PMID: 27626298; PMCID: PMC5361889.
      View in: PubMed   Mentions: 26     Fields:    Translation:Cells
    35. Developing an Acidic Residue Reactive and Sulfoxide-Containing MS-Cleavable Homobifunctional Cross-Linker for Probing Protein-Protein Interactions. Anal Chem. 2016 08 16; 88(16):8315-22. Gutierrez CB, Yu C, Novitsky EJ, Huszagh AS, Rychnovsky SD, Huang L. PMID: 27417384; PMCID: PMC4989248.
      View in: PubMed   Mentions: 26     Fields:    Translation:AnimalsCells
    36. Characterization of Dynamic UbR-Proteasome Subcomplexes by In vivo Cross-linking (X) Assisted Bimolecular Tandem Affinity Purification (XBAP) and Label-free Quantitation. Mol Cell Proteomics. 2016 07; 15(7):2279-92. Yu C, Yang Y, Wang X, Guan S, Fang L, Liu F, Walters KJ, Kaiser P, Huang L. PMID: 27114451; PMCID: PMC4937504.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    37. Quantitative Proteomics Analysis of VEGF-Responsive Endothelial Protein S-Nitrosylation Using Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) and LC-MS/MS. Biol Reprod. 2016 05; 94(5):114. Zhang HH, Lechuga TJ, Chen Y, Yang Y, Huang L, Chen DB. PMID: 27075618; PMCID: PMC4939742.
      View in: PubMed   Mentions: 6     Fields:    Translation:AnimalsCells
    38. Gln40 deamidation blocks structural reconfiguration and activation of SCF ubiquitin ligase complex by Nedd8. Nat Commun. 2015 Dec 03; 6:10053. Yu C, Mao H, Novitsky EJ, Tang X, Rychnovsky SD, Zheng N, Huang L. PMID: 26632597; PMCID: PMC4686759.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    39. Design of CID-cleavable protein cross-linkers: identical mass modifications for simpler sequence analysis. Org Biomol Chem. 2015 Oct 14; 13(38):9793-807. Kandur WV, Kao A, Vellucci D, Huang L, Rychnovsky SD. PMID: 26269432; PMCID: PMC4581996.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    40. Activation of m1 muscarinic acetylcholine receptor induces surface transport of KCNQ channels through a CRMP-2-mediated pathway. J Cell Sci. 2015 Nov 15; 128(22):4235-45. Jiang L, Kosenko A, Yu C, Huang L, Li X, Hoshi N. PMID: 26446259; PMCID: PMC4712786.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    41. Ty3 Retrotransposon Hijacks Mating Yeast RNA Processing Bodies to Infect New Genomes. PLoS Genet. 2015; 11(9):e1005528. Bilanchone V, Clemens K, Kaake R, Dawson AR, Matheos D, Nagashima K, Sitlani P, Patterson K, Chang I, Huang L, Sandmeyer S. PMID: 26421679; PMCID: PMC4589538.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    42. Dissecting Fission Yeast Shelterin Interactions via MICro-MS Links Disruption of Shelterin Bridge to Tumorigenesis. Cell Rep. 2015 Sep 29; 12(12):2169-80. Liu J, Yu C, Hu X, Kim JK, Bierma JC, Jun HI, Rychnovsky SD, Huang L, Qiao F. PMID: 26365187; PMCID: PMC4591219.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimalsCells
    43. Synthesis of two new enrichable and MS-cleavable cross-linkers to define protein-protein interactions by mass spectrometry. Org Biomol Chem. 2015 May 07; 13(17):5030-7. Burke AM, Kandur W, Novitsky EJ, Kaake RM, Yu C, Kao A, Vellucci D, Huang L, Rychnovsky SD. PMID: 25823605; PMCID: PMC4420144.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    44. S-nitrosylation of Cofilin-1 Serves as a Novel Pathway for VEGF-Stimulated Endothelial Cell Migration. J Cell Physiol. 2015 Feb; 230(2):406-17. Zhang HH, Wang W, Feng L, Yang Y, Zheng J, Huang L, Chen DB. PMID: 25056928; PMCID: PMC8906234.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    45. A new in vivo cross-linking mass spectrometry platform to define protein-protein interactions in living cells. Mol Cell Proteomics. 2014 Dec; 13(12):3533-43. Kaake RM, Wang X, Burke A, Yu C, Kandur W, Yang Y, Novtisky EJ, Second T, Duan J, Kao A, Guan S, Vellucci D, Rychnovsky SD, Huang L. PMID: 25253489; PMCID: PMC4256503.
      View in: PubMed   Mentions: 82     Fields:    Translation:HumansAnimalsCells
    46. Endogenous NO upon estradiol-17β stimulation and NO donor differentially regulate mitochondrial S-nitrosylation in endothelial cells. Endocrinology. 2014 Aug; 155(8):3005-16. Satohisa S, Zhang HH, Feng L, Yang YY, Huang L, Chen DB. PMID: 24877627; PMCID: PMC4098011.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    47. Characterizing the dynamics of proteasome complexes by proteomics approaches. Antioxid Redox Signal. 2014 Dec 10; 21(17):2444-56. Kaake RM, Kao A, Yu C, Huang L. PMID: 24423446; PMCID: PMC4241863.
      View in: PubMed   Mentions: 5     Fields:    
    48. Developing new isotope-coded mass spectrometry-cleavable cross-linkers for elucidating protein structures. Anal Chem. 2014 Feb 18; 86(4):2099-106. Yu C, Kandur W, Kao A, Rychnovsky S, Huang L. PMID: 24471733; PMCID: PMC3985771.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    49. Defining dynamic protein interactions using SILAC-based quantitative mass spectrometry. Methods Mol Biol. 2014; 1188:191-205. Wang X, Huang L. PMID: 25059613; PMCID: PMC4444047.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    50. Combining docking site and phosphosite predictions to find new substrates: identification of smoothelin-like-2 (SMTNL2) as a c-Jun N-terminal kinase (JNK) substrate. Cell Signal. 2013 Dec; 25(12):2518-29. Gordon EA, Whisenant TC, Zeller M, Kaake RM, Gordon WM, Krotee P, Patel V, Huang L, Baldi P, Bardwell L. PMID: 23981301; PMCID: PMC4132694.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
    51. A novel role for lipid droplets in the organismal antibacterial response. Elife. 2012 Nov 13; 1:e00003. Anand P, Cermelli S, Li Z, Kassan A, Bosch M, Sigua R, Huang L, Ouellette AJ, Pol A, Welte MA, Gross SP. PMID: 23150794; PMCID: PMC3491588.
      View in: PubMed   Mentions: 58     Fields:    Translation:AnimalsCells
    52. Signal-induced disassembly of the SCF ubiquitin ligase complex by Cdc48/p97. Mol Cell. 2012 Oct 26; 48(2):288-97. Yen JL, Flick K, Papagiannis CV, Mathur R, Tyrrell A, Ouni I, Kaake RM, Huang L, Kaiser P. PMID: 23000173; PMCID: PMC3483439.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    53. Mapping the structural topology of the yeast 19S proteasomal regulatory particle using chemical cross-linking and probabilistic modeling. Mol Cell Proteomics. 2012 Dec; 11(12):1566-77. Kao A, Randall A, Yang Y, Patel VR, Kandur W, Guan S, Rychnovsky SD, Baldi P, Huang L. PMID: 22550050; PMCID: PMC3518129.
      View in: PubMed   Mentions: 29     Fields:    Translation:AnimalsCells
    54. Mapping the protein interaction network of the human COP9 signalosome complex using a label-free QTAX strategy. Mol Cell Proteomics. 2012 May; 11(5):138-47. Fang L, Kaake RM, Patel VR, Yang Y, Baldi P, Huang L. PMID: 22474085; PMCID: PMC3418852.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    55. Casein kinase 2 reverses tail-independent inactivation of kinesin-1. Nat Commun. 2012 Mar 27; 3:754. Xu J, Reddy BJ, Anand P, Shu Z, Cermelli S, Mattson MK, Tripathy SK, Hoss MT, James NS, King SJ, Huang L, Bardwell L, Gross SP. PMID: 22453827; PMCID: PMC3574636.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    56. Oxidative stress-mediated regulation of proteasome complexes. Mol Cell Proteomics. 2011 May; 10(5):R110.006924. Aiken CT, Kaake RM, Wang X, Huang L. PMID: 21543789; PMCID: PMC3098605.
      View in: PubMed   Mentions: 158     Fields:    Translation:HumansAnimalsCells
    57. IL-25 causes apoptosis of IL-25R-expressing breast cancer cells without toxicity to nonmalignant cells. Sci Transl Med. 2011 Apr 13; 3(78):78ra31. Furuta S, Jeng YM, Zhou L, Huang L, Kuhn I, Bissell MJ, Lee WH. PMID: 21490275; PMCID: PMC3199022.
      View in: PubMed   Mentions: 62     Fields:    Translation:HumansCells
    58. Pentatricopeptide repeat proteins stimulate mRNA adenylation/uridylation to activate mitochondrial translation in trypanosomes. Mol Cell. 2011 Apr 08; 42(1):106-17. Aphasizheva I, Maslov D, Wang X, Huang L, Aphasizhev R. PMID: 21474072; PMCID: PMC3073060.
      View in: PubMed   Mentions: 68     Fields:    Translation:AnimalsCells
    59. Quantitative profiling of in vivo-assembled RNA-protein complexes using a novel integrated proteomic approach. Mol Cell Proteomics. 2011 Apr; 10(4):M110.007385. Tsai BP, Wang X, Huang L, Waterman ML. PMID: 21285413; PMCID: PMC3069349.
      View in: PubMed   Mentions: 64     Fields:    Translation:HumansCells
    60. Regulation of the 26S proteasome complex during oxidative stress. Sci Signal. 2010 Dec 07; 3(151):ra88. Wang X, Yen J, Kaiser P, Huang L. PMID: 21139140; PMCID: PMC3140957.
      View in: PubMed   Mentions: 132     Fields:    Translation:HumansAnimalsCells
    61. Computational prediction and experimental verification of new MAP kinase docking sites and substrates including Gli transcription factors. PLoS Comput Biol. 2010 Aug 26; 6(8). Whisenant TC, Ho DT, Benz RW, Rogers JS, Kaake RM, Gordon EA, Huang L, Baldi P, Bardwell L. PMID: 20865152; PMCID: PMC2928751.
      View in: PubMed   Mentions: 50     Fields:    Translation:HumansCells
    62. Development of a novel cross-linking strategy for fast and accurate identification of cross-linked peptides of protein complexes. Mol Cell Proteomics. 2011 Jan; 10(1):M110.002212. Kao A, Chiu CL, Vellucci D, Yang Y, Patel VR, Guan S, Randall A, Baldi P, Rychnovsky SD, Huang L. PMID: 20736410; PMCID: PMC3013449.
      View in: PubMed   Mentions: 170     Fields:    Translation:AnimalsCells
    63. Profiling of protein interaction networks of protein complexes using affinity purification and quantitative mass spectrometry. Mol Cell Proteomics. 2010 Aug; 9(8):1650-65. Kaake RM, Wang X, Huang L. PMID: 20445003; PMCID: PMC2938061.
      View in: PubMed   Mentions: 41     Fields:    
    64. Selective enrichment and identification of azide-tagged cross-linked peptides using chemical ligation and mass spectrometry. J Am Soc Mass Spectrom. 2010 Aug; 21(8):1432-45. Vellucci D, Kao A, Kaake RM, Rychnovsky SD, Huang L. PMID: 20472459; PMCID: PMC3119349.
      View in: PubMed   Mentions: 19     Fields:    Translation:Cells
    65. Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy. J Proteome Res. 2010 Apr 05; 9(4):2016-29. Kaake RM, Milenkovic T, Przulj N, Kaiser P, Huang L. PMID: 20170199; PMCID: PMC3140958.
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    66. Mechanism of U insertion RNA editing in trypanosome mitochondria: the bimodal TUTase activity of the core complex. J Mol Biol. 2010 Jun 25; 399(5):680-95. Ringpis GE, Aphasizheva I, Wang X, Huang L, Lathrop RH, Hatfield GW, Aphasizhev R. PMID: 20362585; PMCID: PMC2885523.
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    67. IKK phosphorylates Huntingtin and targets it for degradation by the proteasome and lysosome. J Cell Biol. 2009 Dec 28; 187(7):1083-99. Thompson LM, Aiken CT, Kaltenbach LS, Agrawal N, Illes K, Khoshnan A, Martinez-Vincente M, Arrasate M, O'Rourke JG, Khashwji H, Lukacsovich T, Zhu YZ, Lau AL, Massey A, Hayden MR, Zeitlin SO, Finkbeiner S, Green KN, LaFerla FM, Bates G, Huang L, Patterson PH, Lo DC, Cuervo AM, Marsh JL, Steffan JS. PMID: 20026656; PMCID: PMC2806289.
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    68. Phosphorylation of threonine 3: implications for Huntingtin aggregation and neurotoxicity. J Biol Chem. 2009 Oct 23; 284(43):29427-36. Aiken CT, Steffan JS, Guerrero CM, Khashwji H, Lukacsovich T, Simmons D, Purcell JM, Menhaji K, Zhu YZ, Green K, Laferla F, Huang L, Thompson LM, Marsh JL. PMID: 19710014; PMCID: PMC2785575.
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    69. GM130-dependent control of Cdc42 activity at the Golgi regulates centrosome organization. Mol Biol Cell. 2009 Feb; 20(4):1192-200. Kodani A, Kristensen I, Huang L, Sütterlin C. PMID: 19109421; PMCID: PMC2642749.
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    70. Guide RNA-binding complex from mitochondria of trypanosomatids. Mol Cell. 2008 Oct 24; 32(2):198-209. Weng J, Aphasizheva I, Etheridge RD, Huang L, Wang X, Falick AM, Aphasizhev R. PMID: 18951088; PMCID: PMC2645705.
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    71. Characterization of the human COP9 signalosome complex using affinity purification and mass spectrometry. J Proteome Res. 2008 Nov; 7(11):4914-25. Fang L, Wang X, Yamoah K, Chen PL, Pan ZQ, Huang L. PMID: 18850735; PMCID: PMC2676908.
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    72. Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry. J Proteome Res. 2008 Oct; 7(10):4566-76. Meierhofer D, Wang X, Huang L, Kaiser P. PMID: 18781797; PMCID: PMC2758155.
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    73. Characterization of the proteasome interaction network using a QTAX-based tag-team strategy and protein interaction network analysis. Proc Natl Acad Sci U S A. 2008 Sep 09; 105(36):13333-8. Guerrero C, Milenkovic T, Przulj N, Kaiser P, Huang L. PMID: 18757749; PMCID: PMC2533190.
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    74. A targeted proteomic analysis of the ubiquitin-like modifier nedd8 and associated proteins. J Proteome Res. 2008 Mar; 7(3):1274-87. Jones J, Wu K, Yang Y, Guerrero C, Nillegoda N, Pan ZQ, Huang L. PMID: 18247557; PMCID: PMC2676899.
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    75. Tandem affinity purification combined with mass spectrometry to identify components of protein complexes. Methods Mol Biol. 2008; 439:309-26. Kaiser P, Meierhofer D, Wang X, Huang L. PMID: 18370112; PMCID: PMC3228642.
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    76. Identifying dynamic interactors of protein complexes by quantitative mass spectrometry. Mol Cell Proteomics. 2008 Jan; 7(1):46-57. Wang X, Huang L. PMID: 17934176.
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    77. Proteomics of proteasome complexes and ubiquitinated proteins. Expert Rev Proteomics. 2007 Oct; 4(5):649-65. Wang X, Guerrero C, Kaiser P, Huang L. PMID: 17941820.
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    78. Mass spectrometric characterization of the affinity-purified human 26S proteasome complex. Biochemistry. 2007 Mar 20; 46(11):3553-65. Wang X, Chen CF, Baker PR, Chen PL, Kaiser P, Huang L. PMID: 17323924.
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    79. Modulation of DRAK2 autophosphorylation by antigen receptor signaling in primary lymphocytes. J Biol Chem. 2007 Feb 16; 282(7):4573-4584. Friedrich ML, Cui M, Hernandez JB, Weist BM, Andersen HM, Zhang X, Huang L, Walsh CM. PMID: 17182616.
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    80. HB tag modules for PCR-based gene tagging and tandem affinity purification in Saccharomyces cerevisiae. Yeast. 2006 Jun; 23(8):623-32. Tagwerker C, Zhang H, Wang X, Larsen LS, Lathrop RH, Hatfield GW, Auer B, Huang L, Kaiser P. PMID: 16823883.
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    81. A tandem affinity tag for two-step purification under fully denaturing conditions: application in ubiquitin profiling and protein complex identification combined with in vivocross-linking. Mol Cell Proteomics. 2006 Apr; 5(4):737-48. Tagwerker C, Flick K, Cui M, Guerrero C, Dou Y, Auer B, Baldi P, Huang L, Kaiser P. PMID: 16432255.
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    82. An integrated mass spectrometry-based proteomic approach: quantitative analysis of tandem affinity-purified in vivo cross-linked protein complexes (QTAX) to decipher the 26 S proteasome-interacting network. Mol Cell Proteomics. 2006 Feb; 5(2):366-78. Guerrero C, Tagwerker C, Kaiser P, Huang L. PMID: 16284124.
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    83. Global approaches to understanding ubiquitination. Genome Biol. 2005; 6(10):233. Kaiser P, Huang L. PMID: 16207362; PMCID: PMC1257457.
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    84. Comprehensive mass spectrometric analysis of the 20S proteasome complex. Methods Enzymol. 2005; 405:187-236. Huang L, Burlingame AL. PMID: 16413316.
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    85. Fus3-regulated Tec1 degradation through SCFCdc4 determines MAPK signaling specificity during mating in yeast. Cell. 2004 Dec 29; 119(7):981-90. Chou S, Huang L, Liu H. PMID: 15620356.
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